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ProteomicsDevelopment of a Trypanosoma cruzi Strain Typing Assay using MS2 peptide spectral libraries (Tc-STAMS2)
Chagas disease is one of the most important neglected diseases with an estimated number of 12 million infected individuals, the majority living in Central and South America. The Trypanosoma cruzi (T.cruzi) protozoan parasite is the etiological agent of Chagas disease. T.cruzi is highly genetically d...
ORGANISM(S): Trypanosoma cruzi 
2018-03-19 | PXD008088 | Pride
Trypanosoma cruzi  discrete typing units (dtus)  mass spectrometry  spectral matching  strain typing methods 
MetabolomicsMetabolic Phenotyping and Strain Characterisation of Pseudomonas aeruginosa Isolates from Cystic Fibrosis Patients Using Rapid Evaporative Ionisation Mass Spectrometry
Rapid evaporative ionisation mass spectrometry (REIMS) is a novel technique for the real-time analysis of biological material. It works by conducting an electrical current through a sample, causing it to rapidly heat and evaporate, with the analyte containing vapour channelled to a mass spectrometer...
2022-01-26 | MTBLS644 | MetaboLights
GenomicsEvaluation of MALDI-TOF MS for molecular typing of Acinetobacter baumannii in comparison with orthogonal methods
Evaluation of MALDI-TOF MS for molecular typing of Acinetobacter baumannii in comparison with orthogonal methods
PRJEB59585 | ENA
TranscriptomicsComparative Genomic Analysis of Clinical Strains of Campylobacter jejuni from South Africa
Background. The bacterial foodborne pathogen Campylobacter jejuni is a common cause of acute gastroenteritis and is also associated with the postinfectious neuropathies, Guillain-Barré and Miller Fisher syndromes. This study described the use of multilocus sequence typing and DNA microarrays to e...
ORGANISM(S): Campylobacter jejuni 
2010-05-27 | E-GEOD-9862 | biostudies-arrayexpress
GenomicsComparison of typing methods for VTEC strains
Comparison of High Resolution Viruelnce Allelic Profiling (HReVAP) typing with Multilocus Sequence Typing and Whole Genome SNPs analysis for typing VTEC strains
PRJEB11886 | ENA
TranscriptomicsGenotyping by array of Pseudomonas aeruginosa strains causing chronic or acute infections in humans
Genotyping of 182 Pseudomonas aeruginosa strains causing chronic or acute infections to humans
ORGANISM(S): Pseudomonas aeruginosa 
2012-08-02 | E-MTAB-1108 | biostudies-arrayexpress
UnknownDiscriminatory Indices of Typing Methods for Epidemiologic Analysis of Contemporary Staphylococcus aureus Strains.
Not available
S-EPMC4635816 | biostudies-literature
UnknownBifidobacteria Strain Typing by Fourier Transform Infrared Spectroscopy.
Not available
S-EPMC8473902 | biostudies-literature
UnknownMetaMLST: multi-locus strain-level bacterial typing from metagenomic samples.
Not available
S-EPMC5314789 | biostudies-literature
UnknownA framework for assessing the concordance of molecular typing methods and the true strain phylogeny of Campylobacter jejuni and C. coli using draft genome sequence data.
Not available
S-EPMC3417556 | biostudies-literature
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