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ProteomicsNonlinear effects of environmental salinity on the gill transcriptome versus proteome of Oreochromis niloticus
Here we report the generation of a data-independent acquisition (DIA) assay library that enables simultaneous targeted proteomics of 1900 O. niloticus gill proteins using a label- and gel-free workflow that is well suited for ecologically relevant field samples. By determining alignment and mismatch...
ORGANISM(S): Oreochromis Niloticus 
PXD024648 | panorama
Proteomics,MultiomicsA deep proteome and transcriptome abundance atlas of 29 healthy human tissues
We generated a systematic, quantitative and deep proteome and transcriptome abundance atlas from 29 paired healthy human to serve as a molecular baseline to study human biology.
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
2019-03-02 | MSV000083508 | MassIVE
ProteomicsIntegrative analysis of proteome and transcriptome dynamics during Bacillus subtilis spore revival
Description Bacillus subtilis forms highly resistant, metabolically inactive spores upon nutrient limitation. These endospores pose challenges to the food and medical sectors. Spores reactivate their metabolism upon contact with germinants through germination and outgrowth, and then develop into ve...
ORGANISM(S): Bacillus Subtilis (ncbitaxon:1423) 
2020-04-02 | MSV000085217 | MassIVE
OtherFunctional Mapping of the Zebrafish Early Embryo Proteome and Transcriptome
Data from PeptideAtlas, [[http://www.peptideatlas.org/PASS/PASS00444 PASS00444]]. Replicate: 2, experiment: G_120105_01_zebrafish_band3, file: folder summary. Published as part of J Proteome Res. 2014 Sep 17 . From the Abstract: {{i}} Zebrafish is a popular system for studying vertebrate developmen...
ORGANISM(S): Fish_e 
GPM32310004416 | GPMDB
ProteomicsVenom proteome of the box jellyfish Chironex fleckeri
Transcriptome and venom proteome of the box jellyfish Chironex fleckeri.
ORGANISM(S): Chironex Fleckeri 
2015-04-14 | MSV000079108 | MassIVE
ProteomicsCapsicum fruit development - Integrative transcriptome and proteome analysis identifies major metabolic pathways involved in pepper fruit development
Pepper(Capsicum annuum L.) fruit development is a complex and genetically programmed process, a comparative study of transcriptome and proteome changes during two varieties of pepper development（IMG, MG, Br and MR） has been carried out by using RNA-Seq and Lable-free quantitation technology.
ORGANISM(S): Capsicum annuum 
2019-01-21 | PXD010746 | Pride
Pepper  fruit development  transcriptome  proteome  cell wall  capsanthin  ascorbate  tocopherol 
ProteomicsAlterations in the sputum proteome and transcriptome in smokers and early-stage COPD patients
Chronic obstructive pulmonary disease (COPD) is one of the most prevalent lung diseases, and involves persistent airflow limitation and incorporates both emphysema and chronic bronchitis. Cigarette smoking has been identified as the main risk factor for disease development and progression. In a basi...
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
2016-10-21 | MSV000080275 | MassIVE
OtherMixed effects of suberoylanilide hydroxamic acid (SAHA) on the host transcriptome and proteome and their implications for HIV reactivation from latency.
Data from ProteomeXchange, PXD ID: PXD002150. File: 14july14_saha_b_65.mzml. Published as part of Antiviral Res. 2015 Sep 3. pii: S0166-3542(15)00213-2 . From the Abstract: {{i}} ... We therefore utilized a combined analysis of effects of SAHA on the host transcriptome and proteome to dissect its m...
ORGANISM(S): Homo_sapiens_viruses, Human 
GPM32310023592 | GPMDB
Resource Reanalysis 
ProteomicsTranscriptome and Proteomic Analysis of Mango (Mangifera indica Linn) Fruits
Transcriptome and Proteomic Analysis of Mango (Mangifera indica Linn) Fruits
ORGANISM(S): Mangifera indica (Mango) 
2015-02-20 | PXD000808 | Pride
Lc-ms Mango 
TranscriptomicsThe Dynamic Transcriptome of Schizosaccharomyces pombe Revealed by RNA/DNA Hybrid Mapping
We determined the strand-specific transcriptome of the fission yeast S. pombe under multiple growth conditions using a novel RNA/DNA hybridization mapping (HybMap) technique. HybMap uses an antibody against an RNA/DNA hybrid to detect RNA molecules hybridized to a high density DNA oligonucleotide ti...
ORGANISM(S): Schizosaccharomyces pombe 
2008-06-29 | E-GEOD-11619 | biostudies-arrayexpress
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