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ProteomicsTo invesigate the role of autophagy in Arabidopsis shoot cellular protein turnover and proteomstasis (15N Spike-in shoot)
Protein turnover analysis using partial 15N labelling and protein abundance analysis using 15N spike-in were coupled to investiage the role of autophagy in protein degradation and proteostasis. Our findings show that dysfuncional autophagy due to loss-of-function autophagy components ATG5 and 11 lea...
ORGANISM(S): Arabidopsis thaliana (Mouse-ear cress) 
2022-10-13 | PXD010948 | Pride
Arabidopsis Protein turnover 15n spike-in Autophagy 
ProteomicsTo invesigate the role of autophagy in Arabidopsis root cellular protein turnover and proteostasis (15N Spike-in root)
Protein turnover analysis using partial 15N labelling and protein abundance analysis using 15N spike-in were coupled to investiage the role of autophagy in protein degradation and proteostasis. Our findings show that dysfuncional autophagy due to loss-of-function autophagy components ATG5 and 11 lea...
ORGANISM(S): Arabidopsis thaliana (Mouse-ear cress) 
2022-07-12 | PXD010992 | Pride
Arabidopsis 15n labelling Protein turnover Autophagy 
ProteomicsProtein abundance changes in response to high light treatment
To characterize Arabidopsis proteomics and transcritomics changes in response to high light treatment. We quantify specific transcipts and protein abundance changes under both control and high light stress conditions. We aim to investigate the causality and interconnection of transcription and pr...
ORGANISM(S): Arabidopsis thaliana (Mouse-ear cress) 
2022-07-12 | PXD010888 | Pride
Arabidopsis High light 15n spike-in Shoot 
ProteomicsTo invesigate the role of autophagy in Arabidopsis root cellular protein turnover and proteostasis
Protein turnover analysis using partial 15N labelling and protein abundance analysis using 15N spike-in were coupled to investiage the role of autophagy in protein degradation and proteostasis. Our findings show that dysfuncional autophagy due to loss-of-function autophagy components ATG5 and 11 lea...
ORGANISM(S): Arabidopsis thaliana (Mouse-ear cress) 
2022-07-12 | PXD010900 | Pride
Arabidopsis 15n labelling Protein turnover Autophagy 
ProteomicsTo invesigate the role of autophagy in Arabidopsis shoot cellular protein turnover and proteostasis, part 2
Protein turnover analysis using partial 15N labelling and protein abundance analysis using 15N spike-in were coupled to investiage the role of autophagy in protein degradation and proteostasis. Our findings show that dysfuncional autophagy due to loss-of-function autophagy components ATG5 and 11 lea...
ORGANISM(S): Arabidopsis thaliana (Mouse-ear cress) 
2022-07-12 | PXD010932 | Pride
Arabidopsis 15n labelling Protein turnover Autophagy 
ProteomicsPytheas SARS-CoV-2 spike protein mRNA sample analysis
Mass spectrometry remains an important method for analysis of modified nucleosides ubiquitously present in cellular RNAs, in particular for ribosomal and transfer RNAs that play crucial roles in mRNA translation and decoding. Furthermore, modifications have effect on the lifetimes of nucleic acids i...
ORGANISM(S): Escherichia coli 
2022-05-04 | PXD030845 | Pride
Isotope labeling Sars-cov-2 spike protein Pytheas Mrna 
UnknownFusion Peptide of SARS-CoV-2 Spike Rearranges into a Wedge Inserted in Bilayered Micelles.
Not available
S-EPMC8370118 | biostudies-literature
ProteomicsPhosphoproteomic analysis of osmotic stress response in Arabidopsis
Elucidating how plants sense and respond to water loss is important for identifying genetic and chemical interventions that may help sustain crop yields in water-limiting environments. Currently, the molecular mechanisms involved in the initial perception and response to dehydration are not well und...
ORGANISM(S): Arabidopsis thaliana (Mouse-ear cress) 
2019-12-19 | PXD001057 | Pride
Phosphorylation arabidopsis stress 
ProteomicsProtein turnover rates under high light treatment
To characterize Arabidopsis proteomics and transcritomics changes in response to high light treatment. We quantify specific transcipts and protein abundance changes under both control and high light stress conditions. We aim to investigate the causality and interconnection of transcription and pr...
ORGANISM(S): Arabidopsis thaliana (Mouse-ear cress) 
2022-05-05 | PXD010889 | Pride
Arabidopsis High light 13c partial labelling Shoot 
UnknownAn Amyloidogenic Fragment of the Spike Protein from SARS-CoV-2 Virus Stimulates the Aggregation and Toxicity of Parkinson's Disease Protein Alpha-Synuclein.
Not available
S-EPMC12412103 | biostudies-literature
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