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ProteomicsCharacterization of the tomato fruit pericarp proteome
In this work, we present an extended characterization of the proteome of the tomato pericarp in its ripe red stage. An extensive fractionation of peptides through high pH reverse phase was performed associated to LC-MS/MS analysis on a Sciex Triple-TOF 6600.
ORGANISM(S): Solanum lycopersicum 
2016-12-22 | PXD004932 | Pride
Tomato  solanum lycopersicum  pericarp  mass-spectrometry  triple-tof 6600 
Genomics
Sequenced microbiota data from METAINFLAMMATION project (Y2020/6600)
PRJNA1279632 | ENA
GenomicsDistinct spatiotemporal dynamics of CD8+ T cell-derived cytokines in the tumor microenvironment (6600)
Distinct spatiotemporal dynamics of CD8+ T cell-derived cytokines in the tumor microenvironment (6600)
PRJNA911257 | ENA
UnknownEpicardial adipose tissue is a robust measure of increased risk of myocardial infarction - a meta-analysis on over 6600 patients and rationale for the EPIC-ACS study.
Not available
S-EPMC8718235 | biostudies-literature
ProteomicsProteomics analysis of Volvariella volvacea after cold treatment
The three independently grown mycelia of V. volvacea V23 or VH3 after chilling stress for 0h and 4h were used for Proteomics analysis. After tryptic digestion and iTRAQ labeling, the samples are separated into 20 components by one-dimensional chromatography, and then the NanoLC-ESI-MS/MS analysis is...
ORGANISM(S): Volvariella volvacea V23 
2020-01-28 | PXD013858 | Pride
Volvariella volvacea mycelium lc-msms 
ProteomicsRed blood cells protein profile is modified in breast cancer patients
We characterized the proteomic composition of RBCs from 53 breast cancer patients (stages I-III and IV), compared with 33 healthy donors. For that, we performed two different proteomic analyses (LC-MS/MS in DDA mode-shotgun- and a SWATH-MS) using the Triple TOF 6600 technology.
ORGANISM(S): Homo sapiens (Human) 
2023-01-17 | PXD030936 | Pride
Red blood cells (rbcs)  breast cancer Metastasis 
MetabolomicsRoot exudate metabolomics of PpPEPC1b-overexpressing rice under phosphate deficiency
Untargeted LC-MS/MS metabolomics of root exudate collection solution from wild-type rice (Oryza sativa L. Zhonghua 11) and three independent overexpression lines (OE8, OE15, OE33) of the elephant grass (Pennisetum purpureum) phosphoenolpyruvate carboxylase gene PpPEPC1b, grown under low phosphate (5...
2026-08-20 | MTBLS15387 | MetaboLights
ProteomicsA comprehensive LFQ benchmark dataset to validate data analysis pipelines on modern day acquisition strategies in proteomics
A comprehensive LFQ benchmark dataset to validate data analysis pipelines on modern day acquisition strategies in proteomics using SCIEX TripleTOF5600 and 6600+, Orbitrap QE-HFX, Waters Synapt GS-Si and Synapt XS and Bruker timsTOF Pro.
ORGANISM(S): Candida albicans (Yeast) Homo sapiens (Human) Escherichia coli 
2022-02-14 | PXD028735 | Pride
Swath Dia Benchmark 
UnknownStable isotope data of Neolithic and Eneolithic populations in the Balkans, 6600 to 4000 BC.
Not available
S-EPMC9058966 | biostudies-literature
MetabolomicsInteraction between rhizobacterial community and host root metabolism influences poplar salt tolerance

Poplar seedlings were cultivated in saline soil with low salt concentrations for 120 days, after which root tissues were harvested for untargeted metabolomic analysis. For each genotype, roots of three to four seedlings were pooled to form one biological replicate, with four biological replicates...

2026-05-15 | MTBLS14479 | MetaboLights
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