991 - OmicsDI

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Unknown (1313)
Genomics (48)
Proteomics (26)
Transcriptomics (19)
Metabolomics (6)
Models (2)
Methylation profiling (2)
Genomic (1)
Other (1)

Organisms

Homo sapiens (19)
Schizophyllum commune H4-8 (12)
Mycobacterium tuberculosis SP7 (12)
Salmonella enterica subsp. enterica serovar Typhimurium str. T000240 (12)
Oryza sativa Japonica Group (12)
Rabbit calicivirus (12)
Crotalus durissus terrificus (12)
Eriocheir sinensis (12)
Candidatus Endoriftia persephonae (12)
Mycobacterium tuberculosis SP10 (12)
Mycobacterium tuberculosis SP13 (12)
Cotesia typhae (12)
Mycobacterium tuberculosis SP22 (12)
Cepaea nemoralis (12)
Mus musculus (5)
Brassica rapa subsp. pekinensis (2)
Hepatitis B virus adw/991 (2)
Anguilla anguilla (1)
Populus tremula x Populus alba (1)
Drosophila melanogaster (1)
Bos indicus (1)
human gammaherpesvirus 4 (1)
Bos indicus x Bos taurus (1)
Bos grunniens x Bos taurus (1)
Bos grunniens (1)
Macaca mulatta (1)
synthetic construct (1)
Bos taurus (1)
Arabidopsis thaliana (1)
Fusobacterium vincentii (1)

Organisms

Homo sapiens (11)
Mus musculus (7)
Salinispora arenicola DSM 45545 (5)
salt lake metagenome (2)
Flavobacterium hydatis (1)
Analcellicampa danfengensis (1)
Acinetobacter guillouiae NIPH 991 (1)
Bifidobacterium vansinderenii (1)
Zea mays (1)
Brassica rapa subsp. pekinensis (1)
Macaca mulatta (1)

Repository

ENA (41)
geo (19)
pride (12)
MassIVE (9)
biostudies-arrayexpress (7)
EGA (5)
MetaboLights (4)
iProX (3)
GNPS (2)
BioModels (1)
dbGaP (1)
PMR (1)

Tissue

Brain (3)
Liver (2)
Eyelid (1)
Skin of eyelid (1)
Seed (1)
Retina (1)
Cell culture (1)

Disease

Alzheimer's disease (2)
Sebaceous adenocarcinoma (1)
Glaucoma (1)
Breast cancer (1)

Technology Type

Mass Spectrometry (12)
Shotgun proteomics (5)
Mass spectrometry (2)
Mass spectrometry assay (2)
Bottom-up proteomics (2)
ILLUMINA, Illumina HiSeq 2500 (1)
MSE (1)
HDMSE (1)
Affinity purification coupled with mass spectrometry proteomics (1)
Data-independent acquisition (1)
SWATH MS (1)

Instrument Platform

Q Exactive (3)
LTQ FT (2)
Illumina Genome Analyzer IIx (1)
LTQ Orbitrap Velos (1)
LTQ Orbitrap Elite (1)
TimsTOF Pro 2 (1)
TimsTOF Pro (1)
Orbitrap Fusion (1)
LTQ Orbitrap (1)
Orbitrap Fusion Lumos (1)
Flow injection analysis MS - negative (1)
Liquid Chromatography MS - alternating - hilic (1)
Liquid Chromatography MS - positive - reverse-phase (1)
Liquid Chromatography MS - negative - reverse-phase (1)
Liquid Chromatography MS - positive - reverse phase (1)
Liquid Chromatography MS - negative - hilic (1)

Publication Date

2024 (8)
2025 (6)
2026 (5)
2023 (5)
2018 (5)
2015 (3)
2014 (3)
2013 (3)
2021 (3)
2017 (3)
2019 (2)
2009 (2)
2022 (2)
2016 (2)
2020 (2)
2011 (1)
2004 (1)

UNIPROT ID/AC

O75326 (1)
P10914 (1)
Q6ZMJ4 (1)
P20339 (1)
P49747 (1)
P35241 (1)
P27348 (1)
P07996 (1)
Q9NPH9 (1)
Q13568 (1)
Q5D1E8 (1)
Q8N884 (1)
O75131 (1)
O00220 (1)
Q8IUC6 (1)
P19876 (1)
Q9NP97 (1)
P54753 (1)
P08754 (1)
Q16548 (1)
O95760 (1)
Q92974 (1)
O95819 (1)
P24001 (1)
P02778 (1)
O43521 (1)
P17275 (1)
P01911 (1)
O43734 (1)
P35613 (1)

ENSEMBL ID

ENSG00000104432 (1)
ENSG00000168811 (1)
ENSG00000182866 (1)
ENSG00000125347 (1)
ENSG00000157368 (1)
ENSG00000169429 (1)
ENSG00000271503 (1)
ENSG00000106366 (1)
ENSG00000144566 (1)
ENSG00000044574 (1)
ENSG00000105664 (1)
ENSG00000137710 (1)
ENSG00000105974 (1)
ENSG00000006062 (1)
ENSG00000134308 (1)
ENSG00000284565 (1)
ENSG00000109458 (1)
ENSG00000197122 (1)
ENSG00000082701 (1)
ENSG00000124762 (1)
ENSG00000002330 (1)
ENSG00000081041 (1)
ENSG00000137801 (1)
ENSG00000102871 (1)
ENSG00000137693 (1)
ENSG00000065559 (1)
ENSG00000111536 (1)
ENSG00000145386 (1)
ENSG00000128604 (1)
ENSG00000284049 (1)

CHEBI ID

CHEBI:74309; HMDB0062518; HMDB62518 (1)
CHEBI:133815; HMDB0030856; HMDB0040140; HMDB30856; HMDB40140 (1)
CHEBI:63334; HMDB0015414; HMDB15414 (1)
CHEBI:89499; HMDB0002522; HMDB0002586; HMDB0002642; HMDB02522; HMDB02586; HMDB02642 (1)
CHEBI:239286; HMDB0015200; HMDB15200 (1)
CHEBI:85165; HMDB0062591; HMDB62591 (1)
CHEBI:85166; HMDB0013043; HMDB0013045; HMDB0013653; HMDB0062663; HMDB13043; HMDB13044; HMDB13045; HMDB13653; HMDB62663 (1)
CHEBI:775715; HMDB0015648; HMDB15648 (1)
CHEBI:63818; HMDB0062325; HMDB62325 (1)
CHEBI:71169; HMDB0000912; HMDB00912 (1)
CHEBI:84634; HMDB0005066; HMDB05066 (1)
CHEBI:48983; HMDB0032717; HMDB0033437; HMDB32717; HMDB33437 (1)
CHEBI:479320; HMDB0013308; HMDB0062338; HMDB13308; HMDB62338 (1)
CHEBI:479286; HMDB0013631; HMDB13631 (1)
CHEBI:51164; HMDB0014727; HMDB14727 (1)
CHEBI:50091; HMDB0004645; HMDB04645 (1)
CHEBI:70811; HMDB0013240; HMDB13240 (1)
CHEBI:132607; HMDB0030555; HMDB0094679; HMDB30555; HMDB94679 (1)
CHEBI:58592; HMDB0034765; HMDB0034768; HMDB0038636; HMDB0062575; HMDB34765; HMDB34768; HMDB38636; HMDB62575 (1)
CHEBI:110179; CHEBI:132606; HMDB0030767; HMDB0037774; HMDB0037775; HMDB0094645; HMDB30767; HMDB37774; HMDB37775; HMDB94645 (1)
CHEBI:61313; HMDB0005943; HMDB0040180; HMDB05943; HMDB40180 (1)
CHEBI:385866; HMDB0000706; HMDB0011167; HMDB0028760; HMDB0028991; HMDB00706; HMDB06113; HMDB11167; HMDB28760; HMDB28991 (1)
CHEBI:74303; HMDB0013238; HMDB13238 (1)
CHEBI:417823; HMDB0030965; HMDB0037517; HMDB30965; HMDB37517 (1)
CHEBI:82944; HMDB0062550; HMDB62550 (1)
CHEBI:68433; CHEBI:68434; CHEBI:73506; HMDB0011170; HMDB0011171; HMDB0028822; HMDB0028823; HMDB0029152; HMDB0029153; HMDB11170; HMDB11171; HMDB28822; HMDB28823; HMDB29152; HMDB29153 (1)
CHEBI:70749; CHEBI:84834; HMDB0000705; HMDB0000756; HMDB00705; HMDB00756 (1)
CHEBI:87428; HMDB0031061; HMDB0059866; HMDB0061657; HMDB31061; HMDB59866; HMDB61657 (1)
CHEBI:20607; HMDB0000982; HMDB0039229; HMDB00982; HMDB39229 (1)
CHEBI:17976; HMDB0033197; HMDB0036047; HMDB0059661; HMDB33197; HMDB36047; HMDB59661 (1)

Metabolite Name

2,4,6-Trimethyl-1,3,5-trithiane (2)
Hydroxidodioxidosulfidosulfate (2)
2-Octenedioic acid (2)
N-Heptanoylglycine (2)
2-Methylbutyrylglycine (2)
Suberic acid (2)
CDP-DG(18:2(9Z,11Z)/a-17:0) (1)
Pentadecanoyl-CoA (1)
Ophiopogonin C'' (1)
DSLET (1)
6''''-Malonylapiin (1)
(5-{4-[2-(3,4-dihydroxyphenyl)-3,5,7-trihydroxy-3,4-dihydro-2H-1-benzopyran... (1)
Myricetin 7-(6''''-galloylglucoside) (1)
(R)-6''-O-(4-Geranyloxy-2-hydroxycinnamoyl)-marmin (1)
Sultamicillin tosilate (1)
6-{3-[6-(3,4-dihydroxy-6-methyl-5-oxooxan-2-yl)-5,7-dihydroxy-4-oxo-4H-chro... (1)
[(6-{[5,7-dihydroxy-2-(4-oxocyclohexa-2,5-dien-1-ylidene)-2H-chromen-3-yl]o... (1)
3,3''-Bis(4''''-hydroxyanigorufone) (1)
({3,4,5-trihydroxy-6-[3,5,7-trihydroxy-2-(2,4,5-trihydroxyphenyl)-3,4-dihyd... (1)
4-{[4-(Diethylamino)phenyl](2,4-disulfophenyl)methylene}-N,N-diethyl-2,5-cy... (1)
6-(2-{8,8-dimethyl-2-oxo-2H,8H-pyrano[2,3-f]chromen-3-yl}-5-methoxyphenoxy)... (1)
6-(2,4-dihydroxyphenyl)-2-{3-[3-(2,4-dihydroxyphenyl)propanoyl]-2,6-dihydro... (1)
Provincialin; NPC (1)
3,4,5-trihydroxy-6-{4-[1-hydroxy-3-(5-methoxy-2,2-dimethyl-2H-chromen-6-yl)... (1)
3,4,5-trihydroxy-6-({15-hydroxy-11-methoxy-13-oxo-6,8,20-trioxapentacyclo[1... (1)
(7''R,8''R)-4,7''-Epoxy-3''-methoxy-4'',5,9,9''-lignanetetrol 9''-glucoside (1)
(4-{3-[2,4-dihydroxy-5-(3-methylbut-2-en-1-yl)phenyl]-2-hydroxy-3-oxopropyl... (1)
8-(2-{[(2E)-3-(3,4-dihydroxyphenyl)prop-2-enoyl]oxy}propan-2-yl)-2-oxo-2H,8... (1)
2-(2,4-dihydroxyphenyl)-3-(3,7-dimethylocta-2,6-dien-1-yl)-5,7-dihydroxy-6-... (1)
13-Hydroxy-5''-O-methylmelledonal (1)

IsPrivate

False (1)

First Public Date

2014 (7)
2019 (5)
2017 (5)
2024 (4)
2018 (4)
2021 (3)
2016 (3)
2025 (2)
2023 (2)
2020 (2)
2013 (2)
2026 (1)
2022 (1)

Modelling Approach

Logical model (1)

Modification

Not available (1)

Study type

Transcription profiling by array (5)
ChIP-seq (1)
RNA-seq of coding RNA (1)

Release Date

2022 (149)
2021 (147)
2020 (141)
2025 (125)
2024 (117)
2023 (114)
2019 (97)
2018 (82)
2017 (60)
2016 (47)
2014 (44)
2015 (43)
2013 (31)
2012 (24)
2026 (16)
2010 (15)
2011 (13)
2008 (12)
2009 (10)
2006 (8)
2007 (6)
2000 (5)
2004 (4)
2003 (3)
2005 (2)
1999 (2)
2001 (1)
1998 (1)
1997 (1)

Lab affiliation

St. Jude Children's Research Hospital (2)
Department of Pharmacology and Neuroscience, The University of North Texas Health Science Center, 3500 Camp Bowie Boulevard, Fort Worth, TX 76107, USA (1)
College of Agriculture, Nanjing Agricultural University, Nanjing, China (1)
Department of Chemistry and Chemical biology, Northeastern University (1)
Breast Cancer Now The Institute of Cancer Research (1)
CECAD Research Cluster, University of Cologne, Joseph-Stelzmann Str. 26, 50931 Köln, Germany. Center for Molecular Medicine Cologne (CMMC), University of Cologne, Robert-Koch Str. 21, 50931 Köln, Germany Institute of Clinical Sciences, Imperial College London, Hammersmith Hospital Campus, Du Cane Road, London W12 0HS, UK (1)
EDyP (1)
St. Jude Children’s Research Hospital (1)
University of Calgary (1)
Pacific Northwest National Laboratory, USA (1)
Tianjin Medical University (1)

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LC-MS-based metabolomic analysis of Vd991 and VdGGCT knockout mutant strains

This study aimed to identify differentially expressed metabolites between Vd991 and VdGGCT knockout mutant strains using liquid chromatography-mass spectrometry (LC-MS). A total of 6 samples, including both Vd991 and VdGGCT knockout mutant groups, were analyzed to explore metabolic changes and disco...

2026-05-11 | MTBLS14397 | MetaboLights

Medial Pterygoid Left

Medial Pterygoid muscle - left

991 | Physiome Model Repository

Salinispora arenicola DSM 45545 strain:CNS-991 | isolate:DSM 45545

Salinispora arenicola CNS-991 transcriptomics - CNS-991-96H-2

PRJNA415660 | ENA

Salinispora arenicola DSM 45545 strain:CNS-991 | isolate:DSM 45545

Salinispora arenicola CNS-991 transcriptomics - CNS-991-216H-2

PRJNA415662 | ENA

Salinispora arenicola DSM 45545 strain:CNS-991 | isolate:DSM 45545

Salinispora arenicola CNS-991 transcriptomics - CNS-991-216H-1

PRJNA415661 | ENA

Salinispora arenicola DSM 45545 strain:CNS-991 | isolate:DSM 45545

Salinispora arenicola CNS-991 transcriptomics - CNS-991-96H-1

PRJNA415659 | ENA

Individual array-based gene expression patterns generated using total RNA prepared from whole blood of 991 participants of the SHIP-TREND cohort

The data set comprises individual array-based genome-wide gene expression data of 991 participants of the SHIP-TREND cohort generated using RNA prepared from whole blood. *** Due to privacy concerns, the SNP and phenotype data is not available with unrestricted access. Individuals wishing to obtain ...

ORGANISM(S): Homo sapiens

2013-08-29 | E-GEOD-36382 | biostudies-arrayexpress

Salinispora arenicola DSM 45545 strain:CNS-991

Salinispora arenicola DSM 45545 strain:CNS-991 Genome sequencing and assembly

PRJNA165283 | ENA

AMPK activator 991 specifically activates SnRK1 and thereby affects seed germination in rice

Sucrose non-fermenting-1-related protein kinase 1 (SnRK1) is a central regulator of metabolism and developmental transition in plant. Compound 991 is a well-known 5′-adenosine monophosphate activated protein kinase (AMPK) activator in mammals. SnRK1 and AMPK are highly conserved. However, whether 99...

ORGANISM(S): Oryza sativa (Rice)

2024-02-04 | PXD044360 | Pride

Acinetobacter guillouiae NIPH 991

Acinetobacter Sequencing

PRJNA183302 | ENA

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