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TranscriptomicsAn PWI- and RRM Motif-Containing Protein Is Critical for Pre-mRNA Splicing and ABA Responses in Arabidopsis
We used RNA-seq platform to determine role of a splicing factor RBM25 in regulation of gene expression and pre-mRNA splicing. We found that a loss-of-function allele of RBM25, rbm25-1, causes up- and down-regulation of a large number of genes. We further found that the rbm25-1 mutation results in d...
ORGANISM(S): Arabidopsis thaliana 
2015-10-28 | E-GEOD-66737 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of Arabidopsis wild type and abi1td mutant plants stressed by ozone or drought to better understand ABA signalling
Ozone at an elevated level is an important environmental stress factor that limits plant growth and development. To test how O3-induced ROS signalling interacts with the ABA pathway we present a global characterization of O3-responsive genes in the abi1td mutant. To understand better ABA signalling ...
ORGANISM(S): Arabidopsis thaliana 
2009-08-27 | E-MEXP-1863 | biostudies-arrayexpress
TranscriptomicsThe Arabidopsis Zinc Finger Protein 3 integrates ABA and light signaling in seed germination and plant development
ZFP3, a nuclear C2H2 zinc finger protein acts as a negative regulator of ABA- suppressed germination. Regulated over-expression of ZFP3 and closely related ZFP1, ZFP4, ZFP6 and ZFP7 confers ABA insensitivity to seed germination while the zfp3,zfp4 double mutant displays enhanced ABA susceptibility. ...
ORGANISM(S): Arabidopsis thaliana 
2014-01-01 | E-GEOD-48661 | biostudies-arrayexpress
TranscriptomicsComprehensive transcriptome analysis of phytohormone pathway genes and miRNAs in ABA initiated strawberry receptacle ripening
We used Illumina sequencing to investigate the global transcriptomic expression of hormonal pathway genes in ABA initiated strawberry receptacle ripening. Expression profiles of hormone synthetic and signaling genes further demonstrated the positive roles of ABA and GA, and the negative role of auxi...
ORGANISM(S): Fragaria x ananassa 
2016-10-27 | E-GEOD-63224 | biostudies-arrayexpress
GenomicsCytosolic calcium and nuclear calcium-regulated transcription networks in response to ABA and JA
Cytosolic calcium and nuclear calcium-regulated transcription networks in response to ABA and JA
PRJNA431480 | ENA
ProteomicsSoybean root tip proteins under flooding with ABA
Flooding is a serious problem for soybean cultivation because it markedly reduces growth. We found that treatment with ABA enhances survival ratio of soybean under flooding stress. To investigate the role of ABA in soybean under flooding stress, proteomic changes were analyzed. Total protein and nuc...
ORGANISM(S): Glycine max 
2013-12-12 | PXD000160 | Pride
Aba nuclear Soybean root tip Flooding 
UnknownABA represses TOR and root meristem activity through nuclear exit of the SnRK1 kinase.
Not available
S-EPMC9282376 | biostudies-literature
TranscriptomicsIdentification of target genes of ABI3 [Agilent 44k]
ABI3 is a key regulator of seed development in Arabidopsis and other plants.To identify genes regulated by ABI3 we performed array based transcriptome analysis of Dexamethasone inducible ABI3 transgenic seedlings. ABI3 mostly in concert with abscisic acid (ABA) was found to activate genes specifical...
ORGANISM(S): Arabidopsis thaliana 
2012-05-31 | E-GEOD-33951 | biostudies-arrayexpress
UnknownPlastid casein kinase 2 knockout reduces abscisic acid (ABA) sensitivity, thermotolerance, and expression of ABA- and heat-stress-responsive nuclear genes.
Not available
S-EPMC4112627 | biostudies-literature
TranscriptomicsTranscription profiling of the radicle and micropylar endosperm cap of Lepidium seeds during germination in ABA
An experiment was performed to compare global transcription patterns in two tissues of Lepidium sativum seeds at different times during imbibition leading up to, but not including, radicle protrusion from the seed (e.g. germination). RNA extractions from the two tissues were hybridised to CATMA Arab...
ORGANISM(S): Lepidium sativum 
2010-10-02 | E-TABM-743 | biostudies-arrayexpress
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