Actin-related proteins

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Unknown (1315)
Transcriptomics (523)
Proteomics (212)
Genomics (127)
Other (3)
Metabolomics (2)
Models (1)
Genomic (1)

Organisms

Homo sapiens (200)
Mus musculus (139)
Arabidopsis thaliana (44)
Saccharomyces cerevisiae (26)
Drosophila melanogaster (18)
Rattus norvegicus (15)
Caenorhabditis elegans (12)
Schizosaccharomyces pombe (10)
Danio rerio (10)
Methanococcus maripaludis S2 (9)
Gallus gallus (9)
Escherichia coli (7)
Entamoeba histolytica (6)
Solea senegalensis (5)
Bacillus subtilis (5)
Streptomyces venezuelae (4)
Salmo salar (4)
Oncorhynchus mykiss (4)
Bos taurus (3)
Cryptococcus neoformans (3)
Sus scrofa (3)
Petrolisthes cinctipes (2)
Aplysia californica (2)
Osmerus mordax (2)
Bombyx mori (2)
Bacillus subtilis subsp. subtilis str. 168 (2)
Schizosaccharomyces pombe 972h- (2)
Lepidium sativum (2)
Zea mays (2)
Hyalella azteca (1)

Organisms

Homo sapiens (29)
Mus musculus (15)
Saccharomyces cerevisiae (6)
Plasmodium falciparum (4)
Drosophila melanogaster (3)
Rattus norvegicus (2)
Danio rerio (2)
Entamoeba histolytica HM-1:IMSS (1)
Oncorhynchus nerka (1)
Stylophora pistillata (1)
Mycoplasmopsis synoviae (1)
Campylobacter jejuni (1)
Scophthalmus maximus (1)
Xenopus laevis (1)
Equus caballus (1)
Apis mellifera (1)
Gallus gallus (1)
Sus scrofa (1)
Hordeum vulgare (1)
Arabidopsis thaliana (1)

Repository

biostudies-arrayexpress (501)
pride (109)
ENA (81)
geo (65)
MassIVE (46)
jPOST (23)
iProX (21)
PAXDB (6)
EGA (5)
PanoramaPublic (4)
GPMDB (2)
MetaboLights (2)
PeptideAtlas (2)
BioModels (1)
dbGaP (1)

Tissue

Cell culture (26)
Brain (10)
Epithelial cell (6)
Kidney (5)
Permanent cell line cell (5)
Blood (4)
Colon (4)
Heart (4)
Lung (4)
Blood plasma (3)
Embryo (3)
Stem cell (3)
Endothelial cell (2)
Epithelial cell of lung (2)
Fibroblast (2)
Lymph node (2)
Skin (2)
Testis (2)
Whole body (2)
Plasma Non-glyco (1)
Astrocyte (1)
Blood cell (1)
Brain microvascular endothelial cell (1)
Cardiac muscle tissue of atrium (1)
Cell suspension culture (1)
Cerebrospinal fluid (1)
Cornea (1)
Dendritic cell (1)
Dermal microvascular endothelial cell (1)
Hippocampus (1)

Disease

Breast cancer (4)
Colon cancer (4)
Disease free (4)
Colorectal cancer (3)
Membranous glomerulonephritis (3)
Alzheimer's disease (2)
Not Available (2)
Duchenne muscular dystrophy (2)
Melanoma (2)
Non-small cell lung carcinoma (2)
Huntington's disease (1)
Parkinson's disease (1)
HIV encephalitis (1)
Pseudomonas aeruginosa rsmA mutant infected (1)
Embryonic lethal at day 8.5 to 9.5 (1)
ARR7ox-4-11 (1)
Dukes D primary colon cancer (1)
Colon cancer metastasis (1)
Tumour (1)
Benign adenoma (1)
N/a (1)
Normal (1)
Atherosclerosis (1)
Atrial fibrillation (1)
Brain cancer (1)
Brain glioblastoma multiforme (1)
Cardiovascular system disease (1)
Diastolic heart failure (1)
Encephalitis (1)
Glioblastoma (1)

Technology Type

Mass Spectrometry (109)
Shotgun proteomics (60)
Bottom-up proteomics (16)
Affinity purification coupled with mass spectrometry proteomics (14)
Gel-based experiment (12)
Data-dependent acquisition (7)
SWATH MS (7)
Data-independent acquisition (6)
All-ion fragmentation (3)
HDMSE (3)
Chemical cross-linking coupled with mass spectrometry proteomics (2)
Top-down proteomics (2)
Illumina Infinium HumanCoreExome Beadchip (1)
Illumina HiSeq 2000 (1)
Mass spectrometry (1)
Mass spectrometry assay (1)
Metaproteomics (1)
Proteogenomics (1)

Instrument Platform

Illumina HiSeq 2000 (9)
Illumina HiSeq 2500 (6)
Illumina NovaSeq 6000 (6)
NextSeq 500 (5)
ArrayWoRx Biochip Reader [Applied Precision] (2)
Axon GenePix 4000B scanning hardware (2)
Affymetrix (2)
Illumina HiSeq 1500 (2)
Instrument (2)
Applied BiosystemsTM GeneChipTM Whole Transcript (WT) PLUS Reagent Kit User Guide (Thermo Fisher Scientific, Waltham, MA, USA). (1)
Applied BiosystemsTM GeneChipTM Clariom S human arrays (1)
PAXgene Blood RNA Kit (PreAnalytiX, Hombrechtikon, Switzerland). (1)
D1000 ScreenTape Analysis, Qubit Fluorometer. (1)
Element AVITI (1)
Agilent 2100 bioanalyzer (1)
NanoDrop ND-1000 (1)
In Silico Molecular Cloning Program (1)
Affymetrix Gene Atlas System (1)
Affymetrix Genechip Command Console software (1)
Trizol Reagent (1)
Illumina Genome Analyzer (1)
GeneChip Scanner 3000 [Affymetrix] (1)
DNA Microarray Scanner BA [Agilent Technologies] (1)
Axon- GenePix4000B (1)
G2565BA DNA microarray scanner [Agilent] (1)
Sigma-Aldrich (1)
NextSeq 2000 (1)
NextSeq 550 (1)
Illumina HiSeq 3000 (1)
Illumina HiSeq 4000 (1)

Publication Date

2010 (68)
2013 (65)
2012 (60)
2014 (57)
2015 (49)
2009 (48)
2023 (42)
2011 (42)
2025 (39)
2008 (37)
2020 (30)
2022 (29)
2019 (28)
2026 (25)
2021 (25)
2016 (24)
2024 (23)
2018 (20)
2017 (19)
2007 (19)
2006 (16)
2005 (13)

UNIPROT ID/AC

1433E_SHEEP (6)
1433Z_SHEEP (6)
6PGD_SHEEP (6)
A1AT_SHEEP (6)
A8DR93_SHEEP (6)
AL1A1_SHEEP (6)
ALBU_SHEEP (6)
ANT3_SHEEP (6)
ANXA2_SHEEP (6)
CERU_SHEEP (6)
COF1_SHEEP (6)
FETUA_SHEEP (6)
G3P_SHEEP (6)
HBB_SHEEP (6)
IDHC_SHEEP (6)
PDXK_SHEEP (6)
PLMN_SHEEP (6)
SODC_SHEEP (6)
THIO_SHEEP (6)
TTHY_SHEEP (6)
W5NPN4_SHEEP (6)
W5NQ45_SHEEP (6)
W5NUE3_SHEEP (6)
W5NUN8_SHEEP (6)
W5NUX8_SHEEP (6)
W5NVC9_SHEEP (6)
W5NXN2_SHEEP (6)
W5NY95_SHEEP (6)
W5NYA7_SHEEP (6)
W5P1X9_SHEEP (6)

ENSEMBL ID

ENSG00000170477 (1)
ENSG00000204131 (1)
ENSMUSG00000021039 (1)
ENSMUSG00000090272 (1)
ENSMUSG00000096833 (1)
ENSMUSP00000106991 (1)
ENSMUSP00000141097 (1)
ENSMUSP00000141542 (1)

CHEBI ID

CHEBI:58027 (1)
CHEBI:58477 (1)
CHEBI:29993 (1)
CHEBI:60377 (1)
CHEBI:29988 (1)
CHEBI:57865 (1)
CHEBI:456215 (1)
CHEBI:9532 (1)
CHEBI:18385 (1)
CHEBI:26806 (1)
CHEBI:17552 (1)
CHEBI:16908 (1)
CHEBI:16977 (1)
CHEBI:13389 (1)
CHEBI:17659 (1)
CHEBI:17895 (1)
CHEBI:17368 (1)
CHEBI:16235 (1)
CHEBI:17622 (1)
CHEBI:30769 (1)
CHEBI:17239 (1)
CHEBI:16708 (1)
CHEBI:15318 (1)
CHEBI:17568 (1)
CHEBI:37574 (1)
CHEBI:44897 (1)
CHEBI:6650 (1)
CHEBI:16828 (1)
CHEBI:17203 (1)
CHEBI:15603 (1)

Metabolite Name

Malate (2)
Uracil (2)
Xanthine (2)
Citrate (2)
Arginine phosphate (1)
Rac-N,N-Didesmethyl-O-desmethylvenlafaxine glucuronide (1)
Rac-2-Despiperidyl-2-aminorepaglinide (1)
P-Acetamidophenyl .beta.-D-glucuronide (1)
All-trans-4-Ketoretinoic acid (1)
Valproic acid .beta.-D-glucuronide (1)
Uroporphyrin III (1)
Uridine-5'-diphospho-n-acetylgalactosamine (1)
Udp-beta-l-rhamnose (1)
Trifucosyllacto-N-hexaose (1)
Soyasapogenol b base + o-hexa-pen-dhex (1)
Soyasapogenol b base + o-hexa-hex (1)
Solasodine base + 2h, o-hex-hex-hex-pen (1)
Slca - sulfolithocholic acid (1)
Salicylic acid .beta.-D-O-glucuronide (1)
Safflor yellow A (1)
Rebaudioside e (1)
Rapamycin (1)
Prostaglandin F3.alpha. (1)
Phosphatidylcholine 18:0-16:0 (1)
Phenylethyl glucosinolate (1)
Phenylethyl 2-glucoside (1)
Perfluorooctylsulfonic acid (1)
Pc 28:0 (1)
Oleanolic acid base + o-hexa-hex (1)
N-[3-hydroxy-1-{[3.4.5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}octadec-4-en-2-yl]hexadecanamide (1)

First Public Date

2014 (24)
2025 (10)
2020 (9)
2023 (7)
2021 (5)
2018 (5)
2017 (5)
2026 (4)
2024 (4)
2019 (3)
2016 (2)
2013 (2)
2015 (1)

Modelling Approach

Ordinary differential equation model (1)

Lab affiliation

Research Unit for Molecular Medicine, Department of clinical Medicine, Aarhus University, Aarhus, Denmark (5)
University Clinic for Poultry and Fish Medicine, University of Veterinary Medicine, Vienna, Austria (5)
Head of the Curie Institute Mass Spectrometry Platform (4)
Aarhus University Department of Biomedicine DK-8000 Aarhus (3)
CRUK - Beatson Institute for Cancer Research - Switchback Rd, Bearsden, Glasgow G61 1BD - United Kingdom (2)
Integrative Parasitology, Centre for Infectious Diseases, University Hospital Heidelberg, Heidelberg University Medical Faculty; Heidelberg, Germany (2)
Shemyakin-Ovchinnikov Institute of Bioorganic Chemistry of the Russian Academy of Sciences (2)
State Key Laboratory of Reproductive Medicine, Nanjing Medical University, Nanjing, Jiangsu,China. (2)
Amsterdam UMC, Vrije Universiteit Amsterdam, Medical Oncology, Cancer Center Amsterdam, OncoProteomics Laboratory, Amsterdam, Netherlands (1)
Associate Professor, Chemistry and Biochemistry, University of Texas at Arlington (1)
Associate Professor, University of Nevada, Reno department of Pharmacology (1)
B CUBE - Center for Molecular Bioengineering, Technische Universität Dresden, Tatzberg 41, 01307 Dresden, Germany (1)
Baker Heart & Diabetes Inst. (1)
Bavarian Center for Biomolecular Mass Spectrometry (BayBioMS) Technical University Munich (TUM) Gregor-Mendel-Straße 4 85354 Freising GERMANY (1)
Beijing Key Laboratory for Radiobiology, Beijing Institute of Radiation Medicine, Beijing 100850, P.R. China (1)
Beijing Municipal Key Laboratory of Child Development and Nutriomics, Capital Institute of Pediatrics, Beijing, China (1)
Bioanalytics, Institute of Biotechnology, Technische Universität Berlin, Berlin, Germany (1)
Boston University (1)
CNC - Center for Neuroscience and Cell Biology, University of Coimbra (1)
CRUK Beatson Institute (1)
CRUK Beatson Institute, Switchback Road, Glasgow G61 1BD, UK. (1)
Cedars-Sinai Medical Center (1)
Cedars-Sinai Medical Center, Smidt Heart Institute (1)
Center for Genomic Regulation, Universitat Pompeu Fabra (1)
Centre for Cancer Cell and Molecular Biology, Barts Cancer Institute, Queen Mary University of London, Charterhouse square, London EC1M 6BQ, The United Kingdom. (1)
Centre for MND Research, Department of Biomedical Sciences, Macquarie University, North Ryde, NSW, 2109 Australia (1)
Departamento de Fisiologia e Biofísica, Instituto de Ciências Biológicas, Universidade Federal de Minas Gerais, Belo Horizonte, Minas Gerais, Brazil. (1)
Departamento de Microbiología II, Facultad de Farmacia, Universidad Complutense de Madrid, Madrid, Spain (1)
Department of Biochemistry, Institute of Chemistry, University of São Paulo, São Paulo, Brazil (1)
Department of Biochemistry, University of Oxford (1)

IsPrivate

False (1)

Classification

protozoa (5)
bacteria (1)

Modification

Not available (1)

Study type

Transcription profiling by array (314)
RNA-seq of coding RNA (53)
ChIP-seq (28)
Unknown experiment type (18)
ChIP-chip by tiling array (14)
Transcription profiling by tiling array (14)
ChIP-chip by array (14)
RNA-seq of non coding RNA (10)
Comparative genomic hybridization by array (7)
Other (6)
Methylation profiling by array (6)
Transcription profiling by RT-PCR (4)
Cell line - High-throughput sequencing (2)
Plant - High-throughput sequencing (1)
RNAi profiling by array (1)
CLIP-seq (1)
Antigen profiling (1)
Spatial transcriptomics by high-throughput sequencing (1)
Hi-C (1)
Single nucleus RNA sequencing (1)
MicroRNA profiling by array (1)
DNA-seq (1)
Proteomic profiling by array (1)
Methylation profiling by high throughput sequencing (1)

Release Date

2022 (116)
2014 (113)
2021 (110)
2013 (109)
2024 (109)
2023 (108)
2010 (99)
2015 (97)
2020 (95)
2025 (92)
2012 (88)
2011 (82)
2016 (73)
2009 (73)
2019 (72)
2018 (70)
2017 (70)
2008 (69)
2007 (46)
2026 (28)
2006 (25)
2005 (25)
2002 (9)
1999 (9)
2001 (8)
2000 (6)
2004 (5)
2003 (4)
1998 (3)
1997 (3)

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The nuclear actin-related protein Arp6 contributes to the radial positioning of chromosome territories.

The chromatin of individual chromosomes is organized into chromosome territories (CTs) in the interphase nucleus. The spatial arrangement of CTs is non-random and evolutionarily conserved. The gene-dense and gene-poor CTs are positioned in the nuclear center and periphery, respectively. As candidate...

ORGANISM(S): Gallus gallus

2015-11-04 | E-GEOD-14220 | biostudies-arrayexpress

Expression in arp6 and swr1 deletion mutants

Actin-related proteins are ubiquitous components of chromatin remodelers, and are conserved from yeast to man. We have examined the role of the budding yeast actin-related protein Arp6 in gene expression, both as a component of the SWR1 complex (SWR-C) and in its absence. We mapped Arp6-binding site...

ORGANISM(S): Saccharomyces cerevisiae

2010-05-01 | E-GEOD-17780 | biostudies-arrayexpress

Distribution of Arp4 in G2/M phase

The actin-related proteins (ARPs) comprise a conserved protein family. Arp4p is found in large multisubunits of the INO80 and SWR1 chromatin remodeling complexes and in the NuA4 histone acetyltransferase complex. Here we show that arp4 (arp4S23AD159A) temperature-sensitive cells are defective in G2/...

ORGANISM(S): Saccharomyces cerevisiae

2010-06-11 | E-GEOD-7276 | biostudies-arrayexpress

PRJNA926111 | ENA

Giant Viruses Encode Actin-Related Proteins.

Not available

S-EPMC8850707 | biostudies-literature

Sequence and comparative genomic analysis of actin-related proteins.

Not available

S-EPMC1289417 | biostudies-literature

Structural biochemistry of nuclear actin-related proteins 4 and 8 reveals their interaction with actin.

Not available

S-EPMC3117639 | biostudies-literature

PRJNA1017869 | ENA

Actin-related protein 6 (Arp6), a core component of the H2A.Z exchange complex SWR1, interacts with proneural proteins and is crucial for efficient onset of proneural protein target gene expression.

ORGANISM(S): Drosophila melanogaster

2023-01-26 | GSE223416 | GEO

The orphan actin-related protein EhARPv2 belongs to the nucleolar snoRNPs molecular complexes of Entamoeba histolytica

PRJNA657364 | ENA

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2184 Results

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