Ad2 - OmicsDI

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Transcriptomics (161)
Unknown (111)
Genomics (32)
Proteomics (28)
Metabolomics (8)
Multiomics (2)
Other (1)

Organisms

Mus musculus (125)
Homo sapiens (41)
Rattus norvegicus (6)
Alphavirus (5)
Anemia (5)
Archaea (5)
Bacteria (5)
Betaherpesvirinae (5)
Borrelia (5)
Chlamydomonas reinhardtii (5)
Chlorella vulgaris (5)
Clostridium perfringens (5)
Dengue virus (5)
Eukaryota (5)
Hepatitis B virus (5)
Human alphaherpesvirus 1 (5)
Human betaherpesvirus 5 (5)
Influenza A virus (5)
Influenza C virus (5)
Japanese encephalitis virus group (5)
Kamptonema sp. (5)
Bos taurus (2)
Danio rerio (2)
Gossypium tomentosum (1)
Macaca fascicularis (1)
Heterocephalus glaber (1)
Gallus gallus (1)
Candida albicans (1)
Sus scrofa (1)
Homo (1)

Organisms

Homo sapiens (6)
Acetivibrio thermocellus AD2 (2)
Cryptococcus neoformans AD2-99a (1)
Cryptococcus neoformans AD2-04a (1)
Cryptococcus neoformans AD2-6a (1)
Cryptococcus neoformans AD2-82a (1)
Roseomonas mucosa (1)
Streptomyces sp. AD2-2 (1)
Cryptococcus neoformans AD2-60a (1)
Burkholderia vietnamiensis (1)
Enterobacter ludwigii (1)
Cryptococcus neoformans (1)
Drosophila melanogaster (1)
Solanum lycopersicum (1)
Gossypium (1)

Repository

biostudies-arrayexpress (162)
ENA (23)
MassIVE (13)
MetaboLights (8)
EGA (6)
iProX (5)
PanoramaPublic (5)
pride (5)
geo (2)
GPMDB (1)

Tissue

Cell culture (3)
Fibroblast of lung (3)
Milk (1)
Whole body (1)

Disease

Apparently healthy (2)
Viral infectious disease (2)
Not Available (1)
Adenovirus infectious disease (1)

Technology Type

Mass spectrometry (6)
Mass Spectrometry (5)
Shotgun proteomics (5)
Mass spectrometry assay (2)

Instrument Platform

Illumina NovaSeq 6000 (6)
Liquid Chromatography MS - negative - reverse phase (5)
NextSeq 500 (4)
Orbitrap Fusion Lumos (4)
Affymetrix GeneChip(R) HT Scanner (3)
Illumina HiSeq 4000 (3)
Q Exactive (3)
Affymetrix GeneChip Scanner 3000 7G (2)
Orbitrap Eclipse (2)
Mastercycler pro S Thermocyler (Eppendorf); 2100 Bioanalyzer (Agilent) (1)
2100 Bioanalyzer (Agilent); Axio Imager.Z2 (ZEISS) (1)
CryoStar NX70 Cryostat (Epredia) (1)
Illumina® (NEB, USA) (1)
TriZol reagent (1)
GeneChip Scanner 3000 [Affymetrix] (1)
Illumina NovaSeq X (1)
NA (1)
Illumina (1)
NextSeq 2000 (1)
NextSeq 550 (1)
Illumina HiSeq 2500 (1)
Instrument (1)
Impact (1)
In-house built IMS-MS with Agilent TOF MS (1)
LTQ Orbitrap Elite (1)
LTQ Orbitrap Velos (1)
Orbitrap Exploris 480 (1)
Orbitrap Fusion (1)
Q-Exactive (1)
Thermo Scientfic LTQ-Orbitrap-Elite MS (1)

Publication Date

2013 (19)
2010 (19)
2011 (18)
2015 (16)
2016 (15)
2014 (14)
2025 (13)
2009 (13)
2012 (10)
2021 (9)
2024 (8)
2008 (8)
2023 (6)
2020 (5)
2006 (5)
2019 (4)
2026 (3)
2022 (3)
2018 (3)
2017 (3)
2007 (1)

CHEBI ID

CHEBI:16566 (3)
CHEBI:27823 (3)
CHEBI:132983 (3)
CHEBI:27480 (3)
CHEBI:24813 (3)
CHEBI:15891 (3)
CHEBI:15727 (3)
CHEBI:17568 (3)
CHEBI:16750 (3)
CHEBI:30915 (3)
CHEBI:16919 (3)
CHEBI:28865 (3)
CHEBI:15756 (3)
CHEBI:18089 (3)
CHEBI:34230 (2)
CHEBI:86583 (2)
CHEBI:52075 (2)
CHEBI:15035 (2)
CHEBI:21363 (2)
CHEBI:15694 (2)
CHEBI:17061 (2)
CHEBI:132477 (2)
CHEBI:53014 (2)
CHEBI:68505 (2)
CHEBI:1606 (2)
CHEBI:25351 (2)
CHEBI:28460 (2)
CHEBI:17521 (2)
CHEBI:32389 (2)
CHEBI:53488 (2)

Metabolite Name

L-Homocystine (2)
N,N-Dimethylarginine (2)
Gamma-Glutamylcysteine (2)
AICA ribonucleotide (2)
Alpha-tocopherol (2)
Epinephrine (2)
UDP-glucose (2)
UDP-galactose (2)
PC(O-18:0/0:0) (2)
PC(20:4(8Z,11Z,14Z,17Z)/0:0) (2)
PC(P-17:0/0:0) (2)
L-Cystine (2)
4-Nitrophenol (2)
NAD+ (2)
Thymine (2)
L-Dopa (2)
Purine (2)
D-(+)-Malic acid (2)
Asp-Phe (2)
L-Ornithine (2)
2-(Dimethylamino)Guanosine (2)
UMP (2)
Taurine (2)
Jasmonic acid (2)
Pimelic acid (2)
Stearic acid (2)
Aldosterone (2)
Suberic acid (2)
Palmitic acid (2)
Mevalonic acid (2)

First Public Date

2013 (6)
2024 (4)
2025 (2)
2022 (2)
2021 (2)
2026 (1)
2023 (1)
2019 (1)
2018 (1)
2017 (1)
2016 (1)
2015 (1)

Classification

fungi (6)
bacteria (2)

Modification

2x(15)N labeled L-lysine (1)
4x(15)N labeled L-arginine (1)

Study type

Transcription profiling by array (125)
RNA-seq of coding RNA (7)
Transcription profiling by RT-PCR (6)
Other (5)
ATAC-seq (3)
Methylation profiling by array (3)
Animal - One-color microarray (2)
Animal - Single-cell sequencing (2)
ChIP-seq (2)
RNA-seq of coding RNA from single cells (2)
Unknown experiment type (1)
Cell line - High-throughput sequencing (1)
Spatial transcriptomics by high-throughput sequencing (1)
Single nucleus RNA sequencing (1)
DNA-seq (1)

Release Date

2011 (23)
2016 (22)
2010 (22)
2015 (20)
2014 (20)
2013 (19)
2021 (17)
2009 (16)
2012 (14)
2008 (11)
2025 (10)
2024 (10)
2022 (9)
2023 (7)
2019 (7)
2018 (7)
2017 (7)
2006 (7)
2020 (6)
2002 (4)
2007 (2)
2001 (2)
2000 (2)
1999 (2)
1997 (2)
2026 (1)
2004 (1)
2003 (1)
1998 (1)
1977 (1)

Lab affiliation

Uppsala University, Department of Chemistry-BMC, Analytical Chemistry (2)
Department of Archaeology, University of York, Heslington, YO10 5DD, United Kingdom (1)
Institut für Biochemie und Biophysik Friedrich-Schiller-Universität Hans-Knöll-Str. 2, D-07745 Jena (1)
Uppsala University, Department of Chemistry-BMC, Science for Life Laboratory, Analytical Chemistry. (1)

Tags

pathogen (8)
pathogen:fungus (6)
pathogen:bacterium (2)
xref:PubMed:38162030 (1)
xref:PubMed:34486248 (1)
xref:PubMed:36939772 (1)
xref:PubMed:39278361 (1)
xref:PubMed:33609158 (1)
xref:PubMed:39307399 (1)
xref:PubMed:22628515 (1)

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Acetivibrio thermocellus AD2

Acetivibrio thermocellus AD2 Genome sequencing

PRJNA82183 | ENA

Streptomyces sp. AD2-2 strain:AD2-2P

Streptomyces sp. AD2-2 strain:AD2-2P Genome sequencing

PRJNA882518 | ENA

Cryptococcus neoformans strain:AD2-07

Cryptococcus neoformans var. grubii AD2-07 Sequencing

PRJNA400610 | ENA

Acetivibrio thermocellus AD2

Acetivibrio thermocellus AD2 Genome sequencing and assembly

PRJNA210894 | ENA

Roseomonas mucosa strain:AD2

Complete genome sequence and comparative analysis of Roseomonas mucosa strain AD2 from patients with atopic dermatitis or from healthy volunteers.

PRJNA386450 | ENA

Burkholderia vietnamiensis strain:AD2

Burkholderia vietnamiensis strain:AD2 Genome sequencing

PRJNA1434276 | ENA

Time-course phosphoproteome response during adenovirus type 2 infection

Time-course systematic and quantitative analysis combining TiO2 enrichment and SILAC to investigate changes in the phosphoproteome of Ad2 and IMR-90 cells after adenovirus infection

ORGANISM(S): Human adenovirus C serotype 2 (HAdV-2) (Human adenovirus 2) Homo sapiens (Human)

2020-07-03 | PXD009562 | Pride

Mass spectrometry Silac Phosphoproteomics Ad2 Human adenovirus

Cryptococcus neoformans AD2-82a

Cryptococcus Sequencing

PRJNA191383 | ENA

Cryptococcus neoformans AD2-6a

Cryptococcus Sequencing

PRJNA191399 | ENA

Cryptococcus neoformans AD2-60a

Cryptococcus neoformans Genome sequencing

PRJNA174542 | ENA

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