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TranscriptomicsMicroarray analysis of human umbilical vein endothelial cells (HUVECs) chronically irradiated with low dose-rate of ionizing radiation for one, three and six weeks.
To obtain more insight in the molecular effects of chronic low dose irradiation on endothelial cells, HUVEC were irradiated with low-dose rate irradiation (137Cs gamma source; 0, 1.4 and 4.1 mGy/h) for several weeks. At different time points (1, 3 and 6 weeks) cells were harvested for RNA extraction...
ORGANISM(S): Homo sapiens 
2018-02-28 | E-MTAB-6521 | biostudies-arrayexpress
TranscriptomicsDiscovery of the p53 targetome in MCF7 cells from RNA-seq and ChIP-seq data
This SuperSeries is composed of the SubSeries listed below. iRegulon: from a gene list to a gene regulatory network using large motif and track collections. RekinM-bM-^@M-^Ys Janky, Annelien Verfaillie, Hana ImrichovM-CM-!, Bram Van de Sande, Laura Standaert, Valerie Christiaens, Gert Hulselmans, ...
ORGANISM(S): Homo sapiens 
2014-05-27 | E-GEOD-47043 | biostudies-arrayexpress
TranscriptomicsRadiation exposure of human coronary artery endothelial cells - 1 day, 7 days, 14 days post-irradiation
In recent years there is a growing epidemiological indication of excess risk of cardiovascular disease at low doses of ionizing radiation without a clear-cut threshold. It is proposed that damage to the vascular endothelium is critical in radiation-related cardiovascular diseases. In order to identi...
ORGANISM(S): Homo sapiens 
2017-04-27 | E-MTAB-5054 | biostudies-arrayexpress
UnknownThe heat shock protein amplifier arimoclomol improves refolding, maturation and lysosomal activity of glucocerebrosidase.
Not available
S-EPMC6306395 | biostudies-literature
Transcriptomics89 NSCLC patients with gene expression profiles and matching CT imaging data available at TCIA.
The Lung3 data set consists of 89 NSCLC patients that were treated at MAASTRO Clinic, The Netherlands. For these patients pretreatment CT scans, tumour delineations and gene expression profiles were available. We used this data set to associate imaging features with gene-expression profiles. 89 samp...
ORGANISM(S): Homo sapiens 
2014-06-19 | E-GEOD-58661 | biostudies-arrayexpress
UnknownEndometriosis and Sexual Quality of Life.
Not available
S-EPMC7471125 | biostudies-literature
no omics definedTiling path analysis to determine copy-number variation in 40 Utah/Morman and Yoruban population samples using NimbleGen technology
A copy-number variation (CNV) analysis was run on 40 CEU and YRI samples across an array set tiling across the human genome. The array contained 42 million oligos spread across 20 arrays. The final design provided 1 probe per 50bp average density across the genome.

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ORGANISM(S): Homo sapiens 
2009-04-01 | E-MTAB-40 | biostudies-arrayexpress
UnknownAn introduction to scripting in Ruby for biologists.
Not available
S-EPMC2722653 | biostudies-literature
TranscriptomicsAn ectopic network of transcription factors regulated by Hippo signaling drives growth and invasion of a malignant tumor model
This SuperSeries is composed of the SubSeries listed below. Refer to individual Series
ORGANISM(S): Drosophila melanogaster 
2016-06-10 | E-GEOD-71354 | biostudies-arrayexpress
UnknownBiomarkers in malignant mesothelioma-an unfulfilled need or a waste of resources?
Not available
S-EPMC5949439 | biostudies-literature
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