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TranscriptomicsGenotyping of human copy-number variation using Agilent 2x105K
Copy-number variation (CNV) genotyping was run on 450 HapMap samples using a custom targeted array. The array contained 105 000 oligos targeted to about 10 000 CNVs.
ORGANISM(S): Homo sapiens 
2009-10-07 | E-MTAB-142 | biostudies-arrayexpress
no omics definedTiling path analysis to determine copy-number variation in 40 Utah/Morman and Yoruban population samples using NimbleGen technology
A copy-number variation (CNV) analysis was run on 40 CEU and YRI samples across an array set tiling across the human genome. The array contained 42 million oligos spread across 20 arrays. The final design provided 1 probe per 50bp average density across the genome.

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ORGANISM(S): Homo sapiens 
2009-04-01 | E-MTAB-40 | biostudies-arrayexpress
UnknownRole of β-glucosidase 2 in aberrant glycosphingolipid metabolism: model of glucocerebrosidase deficiency in zebrafish.
Not available
S-EPMC6824494 | biostudies-literature
UnknownTranscription factor MITF and remodeller BRG1 define chromatin organisation at regulatory elements in melanoma cells.
Not available
S-EPMC4407272 | biostudies-literature
UnknownBRG1 recruitment by transcription factors MITF and SOX10 defines a specific configuration of regulatory elements in the melanocyte lineage (RNA-seq)
Not available
ORGANISM(S): Homo sapiens 
S-ECPF-GEOD-61966 | biostudies-other
TranscriptomicsM-CSF priming of osteoclast precursors can cause osteoclastogenesis-insensitivity, which can be prevented and overcome on bone
Comparison of gene expression of the osteoclast precursor myeloid blast seeded on plastic and on bone, primed with M-CSF for 4 days and culture with M-CSF and RANKL for 1 day. Osteoclasts and macrophages share progenitors that must receive decisive lineage signals driving them into their respective ...
ORGANISM(S): Mus musculus 
2014-06-02 | E-GEOD-58146 | biostudies-arrayexpress
Genomicsena-DATASET-VIB-CME-16-05-2014-16:10:17:695-121 - samples
Description not provided
EGAD00001000849 | EGA
GenomicsIdentification of point mutations, expression perturbations, and gene fusions in T-cell acute lymphoblastic leukemia by RNA-seq
RNA-seq is a promising technology to re-sequence protein-coding genes for the identification of single nucleotide variants, while simultaneously obtaining information on structural variations and gene expression perturbations. T-cell acute lymphoblastic leukemia (T-ALL) is caused by a combination of...
EGAS00001000536 | EGA
GenomicsVIB Institutional DAC
Data Access Committee EGAC00001002939
EGAC00001002939 | EGA
UnknownA local human Vδ1 T cell population is associated with survival in nonsmall-cell lung cancer.
Not available
S-EPMC9236901 | biostudies-literature
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