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ProteomicsCharacterizations of HSP90-interacting complex in renal cells using tandem affinity purification and its potential role in kidney stone formation
Heat shock protein 90 (HSP90) is a highly abundant molecular chaperone that interacts with many other intracellular proteins to regulate various cellular processes. However, compositions of the HSP90-interacting complex remain underinvestigated. This study thus aimed to characterize such complex in ...
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
2018-12-17 | MSV000083252 | MassIVE
ProteomicsLight-controlled affinity purification of protein complexes
Methods to affinity purify proteins are widely used in protein research. One important application is to identify interacting proteins of an affinity-purified protein of interest (POI) by mass spectrometry. Here, we developed an optogenetics-derived and light-controlled affinity purification method ...
ORGANISM(S): Homo sapiens (Human) 
2019-03-18 | PXD012156 | Pride
Affinity purification Mass spectrometry Optogenetics Protein-protein interaction Phytochrome Zap70 
ProteomicsIdentification of Mitogen-Activated Protein Kinase Phosphatase-1 (MKP-1) protein partners using Tandem Affinity Purification and Mass Spectrometry
According to the World Health Organization Report, depressive disorders affect about 10% of the population. The molecular mechanism of the pathogenesis of depression is still not well understood. The new findings point to phosphatases as potential targets for effective depression therapy. The aim of...
ORGANISM(S): Rattus Norvegicus (ncbitaxon:10116) 
2023-01-19 | MSV000091093 | MassIVE
GenomicsDNA affinity purification sequencing (DAP-seq) data of LEAFY (LFY)
DNA affinity purification sequencing (DAP-seq) data of LEAFY (LFY)
PRJNA671605 | ENA
GenomicsMS2-affinity purification coupled with RNA sequencing (MAPS) reveals S. aureus RsaG sRNA targetome
MS2-affinity purification coupled with RNA sequencing (MAPS) reveals S. aureus RsaG sRNA targetome
PRJNA734607 | ENA
ProteomicsxIP-MS: topological analysis of chromatin-associated protein complexes using single affinity purification
In recent years, cross-linking mass spectrometry (XL-MS) has proven to be a robust and effective method of interrogating macromolecular protein complex topologies at peptide resolution. Traditionally, XL-MS workflows have utilized homogenous complexes obtained through time-limiting reconstitution, t...
ORGANISM(S): Homo sapiens (Human) 
2015-11-17 | PXD002987 | Pride
Affinity purification Chemical cross-linking mass-spectrometry Chromatin 
TranscriptomicsAffinity purification of ribosomes and associated RNAs from stress-treated cells using tagged Rpl16a and Rpl16b
This SuperSeries is composed of the following subset Series: GSE13653: Affinity purification of ribosomes and associated RNAs from stress-treated cells GSE13654: Affinity purification of ribosomes and associated RNAs using tagged Rpl16a and Rpl16b Refer to individual Series
ORGANISM(S): Saccharomyces cerevisiae 
2010-06-25 | E-GEOD-13682 | biostudies-arrayexpress
GenomicsMS2-affinity purification coupled with RNA sequencing (MAPS) reveals S. aureus RsaI sRNA targetome
MS2-affinity purification coupled with RNA sequencing (MAPS) reveals S. aureus RsaI sRNA targetome
PRJNA503392 | ENA
GenomicsCharacterization of RNAs captured through a new engineered protein-mediated affinity purification
Characterization of RNAs captured through a new engineered protein-mediated affinity purification
PRJNA884313 | ENA
GenomicsMS2-affinity purification coupled with RNA sequencing (MAPS) revealed MicF sRNA targetome.
MS2-affinity purification coupled with RNA sequencing (MAPS) revealed MicF sRNA targetome.
PRJNA453155 | ENA
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