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TranscriptomicsDifferential expression analysis of T. thermophilus HB8 csoR deficient strain in response to copper.
We observed the expression profile of the total mRNA in Thermus thermophilus HB8 csrR deficient strain at 0 and 30 min after the addition of CuSO4. Three csoR deficient strain of T. thermophilus HB8 were pre-cultured at 70 degC for 16 hours in 3 mL of TT medium containing 0.8% polypeptone, 0.4% yeas...
ORGANISM(S): Thermus thermophilus HB8 
2010-04-13 | E-GEOD-19509 | biostudies-arrayexpress
TranscriptomicsDifferential expression analysis of T. thermophilus HB8 wild-type strain in response to copper.
We observed the expression profile of the total mRNA in Thermus thermophilus HB8 wild-type strain at 0 and 30 min after the addition of CuSO4. Three wild-type strain of T. thermophilus HB8 were pre-cultured at 70 degC for 16 hours in 3 mL of TT medium containing 0.8% polypeptone, 0.4% yeast extract,...
ORGANISM(S): Thermus thermophilus HB8 
2010-04-13 | E-GEOD-19508 | biostudies-arrayexpress
TranscriptomicsSuperSeries for the analysis of transcriptional regulation by Thermus themophilus CsoR (TTHA1719)
We observed the copper response of Thermus thermophilus HB8 wild-type and csoR deficient strain at 0 and 30 min after the addition of 1.25 mM CuSO4, and zinc response of T. thermophilus HB8 wild-type strain at 0 and 30 min after the addition of 1.0 mM ZnSO4. Three wild-type and three csoR deficient ...
ORGANISM(S): Thermus thermophilus HB8 
2010-04-12 | E-GEOD-19521 | biostudies-arrayexpress
TranscriptomicsComparative expression analysis between PfmR (TTHB023) deletion mutant and wild-type of Thermus thermophilus HB8
We observed the expression profile of the total mRNA of PfmR (TTHB023) deletion mutant of Thermus thermophilus HB8 strain grown in a rich (TT) medium at 70M-BM-0C compared with that of wild type. Seven wild-type and three mutant T. thermophilus HB8 strains were each pre-cultured at 70M-BM-0C for 16 ...
ORGANISM(S): Thermus thermophilus HB8 
2013-03-18 | E-GEOD-36909 | biostudies-arrayexpress
TranscriptomicsDifferential expression analysis of Thermus thermophilus HB8 wild-type strain in response to zinc
We observed the expression profile of the total mRNA in Thermus thermophilus HB8 wild-type strain at 0 and 30 min after the addition of ZnSO4. Three wild-type strain of T. thermophilus HB8 were pre-cultured at 70 degC for 16 hours in 3 mL of TT medium containing 0.8% polypeptone, 0.4% yeast extract,...
ORGANISM(S): Thermus thermophilus HB8 
2010-04-13 | E-GEOD-20900 | biostudies-arrayexpress
TranscriptomicsExpression profile of PfmR (TTHB023)-deficient Thermus thermophilus HB8 strain
In order to find function of PfmR protein from T. thermophilus HB8, we observed the expression profile of the total mRNA of the PfmR-deficient strain grown in a rich medium at 70M-BM-0C for 360 min. Three PfmR-deficient T. thermophilus HB8 strains were each pre-cultured at 70M-BM-0C for 16 h in 4 ml...
ORGANISM(S): Thermus thermophilus HB8 
2012-10-02 | E-GEOD-36881 | biostudies-arrayexpress
TranscriptomicsExpression profile of wild-type Thermus thermophilus HB8 strain cultured in TT medium for 6 h, reproduced in 2011
We observed the expression profile of the total mRNA of the wild-type strain grown in a rich medium at 70 deg-C for 360 min. Four wild-type T. thermophilus HB8 strains were each pre-cultured at 70M-BM-0C for 16 h in 4 ml of TT medium containing 0.8% polypeptone, 0.4% yeast extract, 0.2% NaCl, 0.4 mM...
ORGANISM(S): Thermus thermophilus HB8 
2012-10-02 | E-GEOD-36884 | biostudies-arrayexpress
TranscriptomicsExpression profile of wild-type Thermus thermophilus HB8 strain cultured in TT medium for 6 h, reproduced in 2010
We observed the expression profile of the total mRNA of the wild-type strain grown in a rich medium at 70 deg-C for 360 min. Three wild-type T. thermophilus HB8 strains were each pre-cultured at 70M-BM-0C for 16 h in 4 ml of TT medium containing 0.8% polypeptone, 0.4% yeast extract, 0.2% NaCl, 0.4 m...
ORGANISM(S): Thermus thermophilus HB8 
2012-10-02 | E-GEOD-36883 | biostudies-arrayexpress
TranscriptomicsTranscription profile of T. thermophilus HB8 strain lacking mutS, mutL, or mutS2 gene
We analyzed the expression profile of mutS, mutL, or mutS2 deletion mutant strain of Thermus thermophils HB8 during the exponential growth phase. When compared with wild type using t-test (P < 0.01), 8, 111, and 18 genes were over 2-fold up-regulated in mutS, mutL, and mutS2-lacking strains, respec...
ORGANISM(S): Thermus thermophilus HB8 
2011-06-02 | E-GEOD-22567 | biostudies-arrayexpress
TranscriptomicsComparative expression analysis between logarithmic and stationary phase of T. thermophilus HB8 on a synthetic medium
We observed the expression profile of the total mRNA of Thermus thermophilus HB8 wild-type strain grown in a synthetic medium at 70°C. Three wild-type T. thermophilus HB8 strains were pre-cultured at 70°C for 16 h in 3 ml of synthetic medium. The cells (2 ml) were inoculated into 500 ml of the same ...
ORGANISM(S): Thermus thermophilus HB8 
2008-08-03 | E-GEOD-11671 | biostudies-arrayexpress
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