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MetabolomicsCandidatus Alkanophaga archaea from Guaymas Basin hydrothermal vent sediment oxidize petroleum alkanes
Methanogenic and methanotrophic archaea produce and consume the greenhouse gas methane, respectively, using the reversible enzyme methyl-coenzyme M reductase (Mcr). Recently, Mcr variants that can activate multi-carbon alkanes have been recovered from archaeal cultures. These enzymes, called alkyl-c...
2025-07-07 | MTBLS7727 | MetaboLights
MetabolomicsPseudomonas sp. Strain 273 Incorporates Organofluorine into the Lipid Bilayer during Growth with Fluorinated Alkanes
Anthropogenic organofluorine compounds are recalcitrant, globally distributed, and a human health concern. Although rare, natural processes synthesize fluorinated compounds, and some bacteria have evolved mechanisms to metabolize organofluorine compounds. Pseudomonas sp. strain 273 grows with...
2022-06-06 | MTBLS3893 | MetaboLights
TranscriptomicsSaccharomyces cerevisiae BY4741 cells treated with n-alkanes
Transcripitonal profiling of Saccharomyces cerevisiae treated with 2% n-alkanes vs untreatment Multiple condition experiment, S. cerevisiae treated with n-alkanes (n-nonane, n-decane, n-undecane, n-dodecane, respectively) for 24hrs or 48hrs, compared to control (those without treatment)
ORGANISM(S): Saccharomyces cerevisiae 
2015-04-07 | E-GEOD-38653 | biostudies-arrayexpress
ProteomicsDifferential Protein Expression During Growth on Medium Versus Long-Chain Alkanes in the Obligate Marine Hydrocarbon-Degrading Bacterium Thalassolituus oleivorans MIL-1
The marine obligate hydrocarbonoclastic bacterium Thalassolituus oleivorans MIL-1 metabolises a broad range of aliphatic hydrocarbons almost exclusively as carbon and energy sources. We used LC-MS/MS shotgun proteomics to identify proteins involved in aerobic alkane degradation during growth on medi...
ORGANISM(S): Thalassolituus oleivorans MIL-1 
2019-01-14 | PXD011824 | Pride
Shotgun proteomics Alkane degradation Subterminal oxidation Oil pollution Medium-chain alkanes Hydrocarbonoclastic bacteria Thalassolituus oleivorans Long-chain alkanes 
TranscriptomicsSaccharomyces cerevisiae BY4741 cells treated with n-alkanes
Transcripitonal profiling of Saccharomyces cerevisiae treated with 2% n-alkanes vs untreatment
ORGANISM(S): Saccharomyces cerevisiae 
2015-04-07 | GSE38653 | GEO
ProteomicsMulti-omics insights into the response of Aspergillus parasiticus to long-chain alkanes in relation to polyethylene modification
In this study, we employed a multi-omics approach to study the ability of Aspergillus parasiticus MM36, an isolate derived from Tenebrio molitor intestines, to metabolize long-chain alkanes (lcAlk) and secrete enzymes able to modify polyethylene (PE). Following genome sequencing, assembly, and annot...
ORGANISM(S): Aspergillus parasiticus 
2025-05-13 | PXD058271 | Pride
Multi-omics Alkanes Aspergillus Plastic pollution Biodegradation Extracellular Fungi Secretome 
GenomicsTranscriptomics analysis of Alcanivorax borkumensis strain sk2 growing in alkanes, with and without corksorb
Transcriptomics analysis of Alcanivorax borkumensis strain sk2 growing in alkanes, with and without corksorb
PRJEB46411 | ENA
GenomicsComplete genome sequences of three synurbic Pseudomonas aeruginosa isolates harboring the alk-transposon implicated in degradation of Alkanes
Complete genome sequences of three synurbic Pseudomonas aeruginosa isolates harboring the alk-transposon implicated in degradation of Alkanes
PRJEB51809 | ENA
Genomics
methanogenic iso-alkanes-degrading culture
PRJNA449819 | ENA
UnknownRecent trends in microbial production of alkanes.
Not available
S-EPMC12405031 | biostudies-literature
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