Amin V V - OmicsDI

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Unknown (861)
Proteomics (20)
Genomics (13)
Metabolomics (11)
Transcriptomics (9)
Genomic (2)

Organisms

Homo sapiens (14)
Mus musculus (10)
Drosophila simulans (2)
Rattus norvegicus (2)
Salmonella phage SPN3US (2)
Mycobacterium leprae (1)
synthetic construct (1)
Xenopus laevis (1)
Escherichia coli (1)
Bos taurus (1)
Equus caballus (1)
Mahonia (1)
Nicotiana benthamiana (1)
Nitrosopumilus maritimus SCM1 (1)
Oryctolagus cuniculus (1)
Phikzvirus phiKZ (1)
Phytophthora cinnamomi (1)

Repository

pride (18)
biostudies-arrayexpress (17)
MetaboLights (10)
EGA (6)
dbGaP (2)
GNPS (1)
MassIVE (1)

Tissue

Blood plasma (2)
Cell culture (2)
Leaf (2)
Liver (1)
Oocyte (1)
Plant cell (1)
Rumen (1)
T cell (1)

Disease

Normal (2)
Disease free (2)
Lymphoma (1)
Melanoma (1)

Technology Type

Mass Spectrometry (18)
Shotgun proteomics (13)
Mass spectrometry (9)
Affinity purification coupled with mass spectrometry proteomics (4)
Illumina OncoArray (1)
NMR spectroscopy (1)
Bottom-up proteomics (1)
Data-independent acquisition (1)
DiaPASEF (1)
Metaproteomics (1)
SRM/MRM (1)
SWATH MS (1)

Instrument Platform

AB SOLiD 4 System (4)
Liquid Chromatography MS - positive - reverse phase (4)
Liquid Chromatography MS - negative - reverse phase (3)
TSQ Quantis (1)
Q Exactive HF (1)
Atmospheric Pressure Matrix Assisted Laser Desorption/Ionization orbitrap MS - Positive (1)
Direct infusion MS - negative (1)
Gas Chromatography MS - positive (1)
Liquid Chromatography MS - Positive (LC-MS (Positive)) (1)
Liquid Chromatography Tandem MS (LC-MS/MS) (1)
MS Imaging - Atmospheric Pressure Matrix Assisted Laser Desorption/Ionization orbitrap MS - Positive (1)
Nuclear Magnetic Resonance (NMR) - (1)

Publication Date

2015 (8)
2023 (5)
2022 (4)
2019 (4)
2017 (4)
2021 (3)
2025 (3)
2018 (3)
2014 (2)
2013 (2)
2024 (2)
2011 (1)
2010 (1)
2007 (1)
2004 (1)
2026 (1)
2020 (1)
2016 (1)

CHEBI ID

CHEBI:136225 (2)
CHEBI:136479 (2)
CHEBI:138899 (2)
CHEBI:15927 (2)
CHEBI:15940 (2)
CHEBI:16010 (2)
CHEBI:16610 (2)
CHEBI:16750 (2)
CHEBI:17012 (2)
CHEBI:17015 (2)
CHEBI:17053 (2)
CHEBI:17154 (2)
CHEBI:17505 (2)
CHEBI:17859 (2)
CHEBI:18107 (2)
CHEBI:28623 (2)
CHEBI:29016 (2)
CHEBI:30249 (2)
CHEBI:30769 (2)
CHEBI:64424 (2)
CHEBI:64433 (2)
CHEBI:6650 (2)
CHEBI:72998 (2)
CHEBI:9300 (2)
CHEBI:10023 (1)
CHEBI:10082 (1)
CHEBI:10101 (1)
CHEBI:10136 (1)
CHEBI:104018 (1)
CHEBI:125402 (1)

Metabolite Name

L-Formylkynurenine (2)
Niacinamide (2)
Nicotinamide riboside (2)
(+)-Nornicotine (1)
(-)-maackiain (1)
(2S,4R)-N-[(1R,2R)-2-hydroxy-1-[(2R,3S,4S,5R,6R)-3,4,5-trihydroxy-6-(methylthio)-2-oxanyl]propyl]-1-methyl-4-propyl-2-pyrrolidinecarboxamide (1)
(2S,6R)-4-[3-(4-tert-butylphenyl)-2-methylpropyl]-2,6-dimethylmorpholine (1)
(3-hexadecoxy-2-hydroxy-2-methylpropyl) 2-(trimethylazaniumyl)ethyl phosphate (1)
(3R,5R,17S)-10,13-dimethyl-2,3,4,5,6,7,8,9,11,12,14,15,16,17-tetradecahydro-1H-cyclopenta[a]phenanthrene-3,17-diol (1)
(3R,5S)-10,13-dimethyl-17-(6-methylheptan-2-yl)-2,3,4,5,6,7,8,9,11,12,14,15,16,17-tetradecahydro-1H-cyclopenta[a]phenanthren-3-ol (1)
(3S)-10,13-dimethyl-17-(6-methylheptan-2-yl)-2,3,4,7,8,9,11,12,14,15,16,17-dodecahydro-1H-cyclopenta[a]phenanthren-3-ol (1)
(3S)-17-(5-ethyl-6-methylheptan-2-yl)-10,13-dimethyl-2,3,4,5,6,7,8,9,11,12,14,15,16,17-tetradecahydro-1H-cyclopenta[a]phenanthren-3-ol (1)
(3S,5R)-10,13-dimethyl-17-(6-methylheptan-2-yl)-2,3,4,5,6,7,8,9,11,12,14,15,16,17-tetradecahydro-1H-cyclopenta[a]phenanthren-3-ol (1)
(3S,5S)-10,13-dimethyl-17-(6-methylheptan-2-yl)-2,3,4,5,6,7,8,9,11,12,14,15,16,17-tetradecahydro-1H-cyclopenta[a]phenanthren-3-ol (1)
(5R)-10,13-dimethyl-17-(6-methylheptan-2-yl)-1,2,4,5,6,7,8,9,11,12,14,15,16,17-tetradecahydrocyclopenta[a]phenanthren-3-one (1)
(5R)-5-hydroxy-1-(4-hydroxy-3-methoxyphenyl)tetradecan-3-one (1)
(6Z,9Z,12Z,15Z)-henicosa-1,6,9,12,15-pentaene (1)
(6Z,9Z,12Z,15Z)-tricosa-1,6,9,12,15-pentaene (1)
(9Z,12Z)-octadecadien-1-ol (1)
(E)-3-(4-methoxyphenyl)prop-2-enoic acid (1)
(E)-6-hydroxyoctadec-4-enoic acid (1)
(R)-2-Benzylsuccinate (1)
(S)-timolol (anhydrous) (1)
1,2,3,4-tetrakis-O-galloyl-alpha-D-glucose (1)
1,2,3-tripalmitoleoylglycerol (1)
1,2,4-triazines (1)
1,2-dihexadecanoyl-sn-glycero-3-phosphocholine (1)
1,4-benzodiazepines (1)
1,4a-dimethyl-9-oxo-7-propan-2-yl-3,4,10,10a-tetrahydro-2H-phenanthrene-1-carboxylic acid (1)
1,7-bis(4-hydroxyphenyl)-3-heptanone (1)

Study type

ChIP-seq (7)
Transcription profiling by array (5)
RNA-seq of coding RNA (4)
Proteomic profiling by array (1)

Release Date

2022 (100)
2021 (99)
2025 (82)
2024 (77)
2020 (76)
2023 (70)
2015 (61)
2019 (53)
2016 (42)
2018 (38)
2017 (38)
2013 (36)
2014 (30)
2011 (19)
2012 (18)
2010 (14)
2026 (14)
2009 (5)
2007 (3)
2008 (2)
2004 (1)

Lab affiliation

Rochester Institute of Technology (3)
Shiga University of Medical Science (2)
Centre for medicines discovery, University of Oxford (1)
College of Biomedical Engineering & Instrument Science, Zhejiang University (1)
Department of Biomolecular Medicine, Ghent University, Ghent, Belgium VIB Center for Medical Biotechnology, VIB, Ghent, Belgium (1)
Department of Chemistry, Vanderbilt University 5423 Stevenson Center, Nashville, TN 37235 (1)
Department of Medicine, Columbia University (1)
Division of Biochemistry, Department of Biology, Friedrich-Alexander University Erlangen-Nuremberg, Staudtstraße 5, 91058 Erlangen (1)
Donnelly Centre, Department of Molecular Genetics,Department of Biochemistry,University of Toronto, Ontario, Canada (1)
Functional Proteomics, ICR (1)
Hans Merensky Chair in Avocado Research, Department of Biochemistry, Genetics and Microbiology, Faculty of Natural and Agricultural Sciences, Forestry and Agricultural Biotechnology Institute, University of Pretoria, Pretoria 0028, South Africa (1)
Research and Innovation Centre, University of Regina, SK S4S OA2, Canada (1)
University of Edinburgh (1)
University of Hohenheim, Functional Microbiology of Livestock, Stuttgart, Germany (1)
University of Washington (1)

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AMIN domains have a predicted role in localization of diverse periplasmic protein complexes.

Not available

S-EPMC2572700 | biostudies-literature

Parabacteroides distasonis ameliorates insulin resistance via activation of intestinal GPR109a

Gut microbiota plays a key role in insulin resistance (IR). Here we perform a case-control study of Chinese adults (ChiCTR2200065715) and identify that Parabacteroides distasonis is inversely correlated with IR. Treatment with P. distasonis improves IR, strengthens intestinal integrity, and reduces ...

2023-11-01 | MTBLS7943 | MetaboLights

Rapid tests as a practical alternative to slide agglutination for the confirmation of <i>V. cholerae</i> O1.

Not available

S-EPMC12345242 | biostudies-literature

Sodium Rich Vanadium Oxy-Fluorophosphate - Na_3.2 Ni_0.2 V_1.8 (PO₄ )₂ F₂ O - as Advanced Cathode for Sodium Ion Batteries.

Not available

S-EPMC10401166 | biostudies-literature

Cardiac transcriptome of Tcf21-depleted Xenopus embryos

The aim of the approach was to use RNAseq analysis to identify genes expressed in Xenopus epicardium that were affected by embryonic depletion of the epicardial transcription factor Tcf21 compared to control-MO injected siblings. Both upregulated and downregulated genes were validated by RT-PCR and...

ORGANISM(S): Xenopus laevis

2013-07-05 | E-GEOD-45786 | biostudies-arrayexpress

Spatial metabolomics of in situ, host-microbe interactions (UPLC-MS/MS assay)

Spatial metabolomics describes the location and chemistry of small molecules involved in metabolic phenotypes, defense molecules and chemical interactions in natural communities. Most current techniques are unable to spatially link the genotype and metabolic phenotype of microorganisms in situ at a ...

2019-11-15 | MTBLS746 | MetaboLights

Microbiome composition and presence of cultivable commensal groups of Southern Tamanduas (Tamandua tetradactyla) varies with captive conditions.

Not available

S-EPMC11064412 | biostudies-literature

Report of SARS-CoV-2 B1.1.7 Lineage in Morocco.

Not available

S-EPMC8063648 | biostudies-literature

Comparative Performance Evaluation of FilmArray BioFire RP2.1 and MAScIR 2.0 Assays for SARS-CoV-2 Detection.

Not available

S-EPMC9177333 | biostudies-literature

Spatial metabolomics of in situ, host-microbe interactions (On-tissue MALDI imaging MS/MS assay)

2019-11-15 | MTBLS805 | MetaboLights