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AMIN domains have a predicted role in localization of diverse periplasmic protein complexes.


ABSTRACT: We describe AMIN (Amidase N-terminal domain), a novel protein domain found specifically in bacterial periplasmic proteins. AMIN domains are widely distributed among peptidoglycan hydrolases and transporter protein families. Based on experimental data, contextual information and phyletic profiles, we suggest that AMIN domains mediate the targeting of periplasmic or extracellular proteins to specific regions of the bacterial envelope.

SUBMITTER: de Souza RF 

PROVIDER: S-EPMC2572700 | biostudies-literature | 2008 Nov

REPOSITORIES: biostudies-literature

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AMIN domains have a predicted role in localization of diverse periplasmic protein complexes.

de Souza Robson Francisco RF   Anantharaman Vivek V   de Souza Sandro José SJ   Aravind L L   Gueiros-Filho Frederico J FJ  

Bioinformatics (Oxford, England) 20080821 21


We describe AMIN (Amidase N-terminal domain), a novel protein domain found specifically in bacterial periplasmic proteins. AMIN domains are widely distributed among peptidoglycan hydrolases and transporter protein families. Based on experimental data, contextual information and phyletic profiles, we suggest that AMIN domains mediate the targeting of periplasmic or extracellular proteins to specific regions of the bacterial envelope. ...[more]

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