An Hao H - OmicsDI

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Unknown (3255)
Proteomics (280)
Transcriptomics (152)
Metabolomics (50)
Genomics (17)
Models (4)
Other (2)
Multiomics (1)

Organisms

Homo sapiens (112)
Mus musculus (79)
Arabidopsis thaliana (11)
Oryza sativa (8)
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Escherichia coli (4)
cellular organisms (4)
Oryza sativa Japonica Group (4)
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Caenorhabditis elegans (2)
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Aspergillus fumigatus (1)
Schizosaccharomyces pombe (1)
Campylobacter jejuni (1)

Organisms

Oryza sativa (2)

Repository

biostudies-arrayexpress (165)
pride (142)
iProX (113)
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Tissue

Cell culture (48)
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Blood serum (1)
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Disease

Cervix carcinoma (3)
Pancreatic ductal adenocarcinoma (3)
Not Available (2)
Breast cancer (2)
Lung cancer (2)
Wounds and Injuries (2)
Osteocytes/osteoblasts (1)
Normal (1)
Brain glioblastoma multiforme (1)
Carcinoma (1)
Cardiovascular system disease (1)
Cholangiocarcinoma (1)
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Disease free (1)
Hydrocephalus (1)
Kidney disease (1)
Leukemia (1)
Malignant neoplasm of ovary (1)
Obesity (1)
Ovarian carcinoma (1)
Prostate adenocarcinoma (1)

Technology Type

Mass Spectrometry (142)
Shotgun proteomics (77)
Mass spectrometry (33)
Bottom-up proteomics (19)
Data-independent acquisition (10)
Mass spectrometry assay (8)
Affinity purification coupled with mass spectrometry proteomics (8)
SWATH MS (8)
Data-dependent acquisition (7)
NMR spectroscopy (6)
Gel-based experiment (6)
Top-down proteomics (6)
Affinity proteomics (3)
SRM/MRM (3)
All-ion fragmentation (2)
Mass spectrometry imaging (2)
Chemical cross-linking coupled with mass spectrometry proteomics (1)
DiaPASEF (1)
Proteogenomics (1)

Instrument Platform

Liquid Chromatography MS - negative - reverse phase (19)
Liquid Chromatography MS - positive - reverse phase (19)
BGISEQ-500 (5)
6550 iFunnel Q-TOF LC/MS (5)
Q Exactive HF-X (5)
Orbitrap Fusion Lumos (4)
Bruker (4)
Liquid Chromatography MS - negative (4)
Liquid Chromatography MS - positive (4)
Q Exactive (3)
Liquid Chromatography MS - negative - hilic (3)
Liquid Chromatography MS - positive - hilic (3)
Illumina MiSeq (2)
Illumina NovaSeq 6000 (2)
NextSeq 500 (2)
Instrument (2)
TripleTOF 5600 (2)
Liquid Chromatography MS - Negative (LC-MS (Negative)) (2)
Liquid Chromatography MS - Positive (LC-MS (Positive)) (2)
10X Chromium Controller (1)
Illumina NovaSeq X (1)
DNBSEQ-T7 (1)
Illumina HiSeq 2500 (1)
Illumina HiSeq 2000 (1)
MicrOTOF-Q II (1)
Q Exactive HF (1)
Q-Exactive H-FX (1)
Q-Exactive HFX (1)
TripleTOF 5600+ (1)
TripleTOF 6600 (1)

Publication Date

2024 (55)
2021 (54)
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2022 (46)
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2019 (28)
2020 (26)
2012 (25)
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2014 (24)
2015 (23)
2011 (22)
2013 (19)
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2016 (14)
2010 (12)
2017 (9)
2009 (5)
2008 (3)
2005 (2)
2007 (2)
2003 (1)
2027 (1)
2002 (1)
2001 (1)

UNIPROT ID/AC

P06208-2 (2)
Q9LIE5 (1)
O24646 (1)
Q9FFA7 (1)
Q9LTJ6 (1)
Q9FN03 (1)
Q8LGH4 (1)
Q9M086 (1)
Q9SYX2 (1)
P43254 (1)
P07263-2 (1)
P32874 (1)
P38431-2 (1)
Q0045 (1)
Q0085 (1)
Q0105 (1)
Q01532 (1)
Q0250 (1)
Q12337 (1)
R0020C (1)

CHEBI ID

CHEBI:30769 (15)
CHEBI:17368 (14)
CHEBI:17154 (13)
CHEBI:16919 (13)
CHEBI:16704 (13)
CHEBI:18012 (12)
CHEBI:15891 (12)
CHEBI:17568 (12)
CHEBI:15354 (11)
CHEBI:78320 (11)
CHEBI:25017 (11)
CHEBI:16737 (11)
CHEBI:28300 (11)
CHEBI:16750 (11)
CHEBI:16708 (11)
CHEBI:15756 (11)
CHEBI:17596 (11)
CHEBI:16610 (10)
CHEBI:27266 (10)
CHEBI:17053 (10)
CHEBI:15428 (10)
CHEBI:16449 (10)
CHEBI:17895 (10)
CHEBI:7916 (10)
CHEBI:24813 (10)
CHEBI:55474 (1)
CHEBI:56080 (1)
CHEBI:61448 (1)
CHEBI:36080 (1)
CHEBI:33699 (1)

Metabolite Name

Creatine (8)
Taurine (7)
Hypoxanthine (7)
Inosine (7)
Uridine (7)
Creatinine (7)
Cytidine (7)
Niacinamide (7)
Guanine (7)
Adenosine (7)
Guanosine (6)
L-Arginine (6)
Tyrosine (6)
Spermidine (5)
Xanthosine (5)
Uracil (5)
Citric acid (5)
L-Tyrosine (5)
Histidine (5)
Pantothenic acid (5)
Naringenin (5)
Valine (4)
Taurocholic acid (4)
L-Leucine (4)
Eicosapentaenoic acid (4)
Palmitoleic acid (4)
L-Methionine (4)
Adenine (4)
Xanthine (4)
L-Glutamine (4)

First Public Date

2014 (2)

Modelling Approach

Ordinary differential equation model (3)

Lab affiliation

Department of Cancer Biology, Dana-Farber Cancer Institute, Boston, MA 02215, USA., Department of Biological Chemistry and Molecular Pharmacology, Harvard Medical School, Boston, MA 02115, USA (13)
Shandong Provincial Key Laboratory of Applied Mycology, College of Life Sciences, Qingdao Agricultural University, China (3)
Tianjin Medical University Cancer Institute and Hospital (3)
College of Chemistry and Molecular Engineering, Peking University, Beijing, China. (2)
Department of Biochemistry, University of Texas Southwestern Medical Center, Dallas, 75390, TX, USA (2)
Department of Clinical Pharmacy, University of Michigan (2)
Department of Molecular Pharmacology and Therapeutics Columbia University Irving Medical Center (2)
Department of Neurological Surgery, Washington University in St. Louis School of Medicine (2)
Key Laboratory of Tropical Marine Bio-resources and Ecology, South China Sea Institute of Oceanology, Chinese Academy of Sciences, Guangzhou, China (2)
Nanjing Med Univ, State Key Lab Reprod Med, Dept Histol & Embryol, 140 Hanzhong Rd, Nanjing 210029, Jiangsu, Peoples R China. (2)
Northeast Normal University (2)
SJTU (2)
State Key Laboratory of Reproductive Medicine and Offspring Health, Department of Histology and Embryology, Gusu School, Nanjing Medical University (2)
VIB Center for Medical Biotechnology, VIB, Ghent, B9052, Belgium Department of Biomolecular Medicine, Ghent University, Ghent, B9052, Belgium (2)
1Department of Neurosurgery, Yale School of Medicine, New Haven, CT, USA. Department of Neurosurgery, Massachusetts General Hospital and Harvard Medical School, Boston, Massachusetts, USA Broad Institute of Harvard and MIT, Cambridge, Massachusetts, USA (1)
Beijing Geriatric Healthcare and Disease Prevention Center, Xuanwu Hospital, Capital Medical University, Beijing, China. (1)
Beijing Key Laboratory of Cardiometabolic Molecular Medicine, Institute of Molecular Medicine, Peking University, Beijing, China (1)
Beijing University of Agriculture (1)
Biochemistry (1)
Biological Chemistry and Molecular Pharmacology, Harvard Medical School, Boston, MA 02115, USA (1)
CAS Key Laboratory of Tropical Marine Bio-Resources and Ecology, South China Sea Institute of Oceanology, Chinese Academy of Sciences, Guangzhou, China (1)
CAS Key Laboratory of Tropical Marine Bio-resources and Ecology, South China Sea Institute of Oceanology, Chinese Academy of Sciences, Guangzhou, China (1)
CAS Key Laboratory of Tropical Marine Bio-resources and Ecology, South China Sea Institute of Oceanology, Chinese Academy of Sciences,Guangzhou, China (1)
Center for Alzheimer's and Related Dementias (CARD), NIA and NINDS, NIH, Bethesda, Maryland, USA. (1)
Center for Alzheimer’s Disease and Related Dementias (CARD) National Institute on Aging (NIA) National Institutes of Health (NIH) (1)
Center of Deep-sea Research, Institute of Oceanology Chinese Academy of Sciences (1)
Charles Perkins Centre, School of Medical Sciences, The University of Sydney, Sydney, NSW, Australia. (1)
China Agricultural University (1)
Chinese Academy of Agricultural Sciences, Institute of Apiscultural Research (1)
College of Agronomy, Northwest A&F University, Yangling, Shanxi, China (1)

IsPrivate

False (4)

Model Flag

Non Kinetic (1)

Modification

-17.026549 (1)
0.984016 (1)
10.008269 (1)
15.994915 (1)
42.010565 (1)
45.029395 (1)
57.021464 (1)
6.020129 (1)

Study type

Transcription profiling by array (93)
RNA-seq of coding RNA (27)
Methylation profiling by array (8)
ChIP-seq (6)
DNA-seq (5)
RNA-seq of coding RNA from single cells (5)
ChIP-chip by tiling array (4)
Other (4)
Comparative genomic hybridization by array (3)
RNA-seq of non coding RNA (3)
Methylation profiling by high throughput sequencing (2)
Unknown experiment type (1)
ChIP-chip by array (1)
Transcription profiling by RT-PCR (1)
Bisulfite-seq (1)
Genotyping by high throughput sequencing (1)

Release Date

2022 (505)
2025 (479)
2023 (397)
2024 (385)
2021 (300)
2020 (241)
2019 (195)
2018 (150)
2017 (137)
2016 (115)
2015 (105)
2026 (77)
2014 (76)
2013 (60)
2012 (58)
2011 (51)
2010 (36)
2009 (19)
2008 (17)
2007 (7)
2005 (3)
2006 (2)
2002 (2)
2003 (1)
2004 (1)
1999 (1)

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Complete plastome sequence of Ardisia bullata G. H. Huang & G. Hao, an endemic species in Hainan.

Not available

S-EPMC7782065 | biostudies-literature

Pan-Genomic and Transcriptomic Analyses of Marine Pseudoalteromonas agarivorans Hao 2018 Revealed Its Genomic and Metabolic Features.

Not available

S-EPMC9027991 | biostudies-literature

Metabolic regulation of ‘Ca. Methylacidiphilum fumariolicum’ SolV cells grown under different nitrogen and oxygen limitations

Aerobic methanotrophic bacteria can use methane as their sole energy source. The discovery of ‘Ca. Methylacidiphilum fumariolicum’ strain SolV and other verrucomicrobial methanotrophs has revealed that the ability of bacteria to oxidize CH4 is much more diverse than has previously been assumed in te...

ORGANISM(S): Methylacidiphilum fumariolicum

2012-09-01 | E-GEOD-40528 | biostudies-arrayexpress

Effect of Artemisinin on Aspergillus fumigatus gene expression program

We examined the antifungal activity of artemisinin against Aspergillus fumigatus (A. fumigatus), a pathogenic filamentous fungus responsible for allergic and invasive aspergillosis in humans and analyzed transcript profiles of the fungus on exposure to Artemisinin. A. fumigatus spores were cultured ...

ORGANISM(S): Aspergillus fumigatus

2011-05-11 | E-GEOD-21297 | biostudies-arrayexpress

Functional spectrum of USP7 pathogenic variants in Hao-Fountain syndrome: Insights into the enzyme's activity, stability, and allosteric modulation.

Not available

S-EPMC12501124 | biostudies-literature

Interleukin-4 from curcumin-activated OECs emerges as a central modulator for increasing M2 polarization of microglia/macrophage in OEC anti-inflammatory activity for functional repair of spinal cord injury.

Not available

S-EPMC10916222 | biostudies-literature

Proteomics analysis of Hypsizygus marmoreus

Hypsizygus marmoreus is one of the most popular industrialized cultivation mushrooms in East Asia. H. marmoreus is the third wildly cultivated industrialized cultivated mushroom in China now behind only Flammulina velutipes and Pleurotus eryngii. H. marmoreus is a low-temperature fruiting mushroom. ...

ORGANISM(S): Hypsizygus marmoreus

2020-12-14 | PXD017654 | Pride

Autotoxicity mechanism of Oryza Sativa: Microarray analysis of rice plants in response to allelochemical ferulic acid

Autotoxicity plays an important mechanism in regulating plant productivity. Ferulic acid (FA) is phytotoxic and was identified in extracts and residues of rice plants as a candidate for rice allelochemicals. To help characterize the autotoxicity mechanism of rice, we present the first large-scale, t...

ORGANISM(S): Oryza sativa

2013-07-22 | E-GEOD-34899 | biostudies-arrayexpress

Yin-Chen-Hao Tang Attenuates Severe Acute Pancreatitis in Rat: An Experimental Verification of In silico Network Target Prediction.

Not available

S-EPMC5061810 | biostudies-literature

Metabonomics uncovers a reversible proatherogenic lipid profile during infliximab therapy of inflammatory bowel disease

BACKGROUND: One-third of inflammatory bowel disease (IBD) patients show no response to infliximab (IFX) induction therapy, and approximately half of patients responding become unresponsive over time. Thus, identification of potential treatment response biomarkers are of great cl...

2022-01-13 | MTBLS239 | MetaboLights

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BACKGROUND: One-third of inflammatory bowel disease (IBD) patients show no response to infliximab (IFX) induction therapy, and approximately half of patients responding become unresponsive over time. Thus, identification of potential treatment response biomarkers are of great cl...

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