Anastasia L L - OmicsDI

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Unknown (73)
Transcriptomics (50)
Proteomics (23)
Genomics (8)
Models (2)
Multiomics (1)
Metabolomics (1)

Organisms

Homo sapiens (39)
Mus musculus (14)
Fusarium sinicum (12)
Drosophila melanogaster (7)
Saccharomyces cerevisiae (5)
Tigriopus californicus (1)
synthetic construct (1)
Gallus gallus (1)
Danio rerio (1)

Repository

biostudies-arrayexpress (52)
PAXDB (12)
EGA (7)
pride (6)
MassIVE (3)
BioModels (2)
jPOST (1)
MetaboLights (1)
PanoramaPublic (1)

Tissue

Heart (3)
Blood serum (1)
Pancreas (1)
Permanent cell line cell (1)
Placenta (1)

Disease

Immunoglobulin light chain amyloidosis (2)
Type 2 diabetes mellitus (1)

Technology Type

Mass Spectrometry (6)
Bottom-up proteomics (3)
Data-dependent acquisition (2)
AB SOLiD 4 System (1)
Illumina HiSeq 2000 (1)
Mass spectrometry (1)
All-ion fragmentation (1)
Shotgun proteomics (1)

Instrument Platform

G2505B DNA microarray scanner (2)
Illumina HiSeq 1500 (2)
NextSeq 500 (2)
Genolab M (1)
GeneChip Scanner 3000 7G (1)
NextSeq 550 (1)
Illumina HiSeq 2500 (1)
Illumina HiSeq 4000 (1)
LTQ Orbitrap Velos (1)
Q Exactive HF (1)
TripleTOF 5600 (1)
Xevo G2 QTOF (Waters) (1)

Publication Date

2013 (17)
2015 (9)
2014 (9)
2012 (9)
2021 (6)
2023 (5)
2009 (5)
2024 (4)
2011 (4)
2025 (3)
2018 (2)
2005 (1)
2016 (1)
2010 (1)
2008 (1)
2006 (1)

UNIPROT ID/AC

1433B_HUMAN (12)
1433E_HUMAN (12)
1433F_HUMAN (12)
1433G_HUMAN (12)
1433S_HUMAN (12)
1433T_HUMAN (12)
1433Z_HUMAN (12)
2AAA_HUMAN (12)
3HIDH_HUMAN (12)
4F2_HUMAN (12)
5NTD_HUMAN (12)
9606.ENSP00000291295 (12)
9606.ENSP00000330842 (12)
9606.ENSP00000347168 (12)
9606.ENSP00000348924 (12)
9606.ENSP00000349467 (12)
9606.ENSP00000352119 (12)
9606.ENSP00000352627 (12)
A2A5Z6 (1)
A9XB08 (1)
O35253 (1)
P04202 (1)
P97471 (1)
Q05CN3 (1)
Q60698 (1)
Q60979 (1)
Q62312 (1)
Q62432 (1)
Q64729 (1)
Q99ML9 (1)

CHEBI ID

CHEBI:26523 (1)

Metabolite Name

(+-)8,9-DHET (1)
(2E,6E)-Farnesol (1)
(S)-2-aminobutyric acid (1)
.beta.-Cyano-L-alanine (1)
.beta.-Homoproline (1)
1,2-dioleoyl-sn-glycero-3-phosphatidylcholine (1)
1-Aminocyclopropanecarboxylic acid (1)
1-Methylhistamine (1)
1-Methylnicotinamide (1)
1-Myristoyl-sn-glycero-3-phosphocholine (1)
1-O-(cis-9-Octadecenyl)-2-O-acetyl-sn-glycero-3-phosphocholine (1)
1-Oleoyl-sn-glycero-3-phosphocholine (1)
1-Palmitoyl-2-hydroxy-sn-glycero-3-phosphoethanolamine (1)
1-Palmitoyl-sn-glycero-3-phosphocholine (1)
1-Palmitoylglycerol (1)
1-Stearoyl-2-arachidonoyl-sn-glycerol (1)
1-Stearoyl-2-hydroxy-sn-glycero-3-phosphocholine (1)
1-Stearoyl-2-hydroxy-sn-glycero-3-phosphoethanolamine (1)
1-Stearoyl-sn-glycerol (1)
16-Hydroxypalmitic acid (1)
2'-Deoxyinosine (1)
2'-Deoxyuridine (1)
2-Amino-2-methyl-1,3-propanediol (1)
2-Hydroxyadenine (1)
2-Methylbutyroylcarnitine (1)
2-Phenylacetamide (1)
2-Phenylbutyric acid (1)
20-Hydroxyarachidonic acid (1)
25-hydroxyvitamin D3 (1)
3'-O-methyladenosine (1)

IsPrivate

False (2)

Model Flag

Non Kinetic (1)

Modelling Approach

Ordinary differential equation model (1)

Study type

Transcription profiling by array (28)
RNA-seq of coding RNA (8)
Other (4)
High-throughput sequencing (2)
MicroRNA profiling by array (2)
RNA-seq of total RNA (2)
RNAi profiling by array (1)
ChIP-seq (1)
Methylation profiling by array (1)
RNA-seq of coding RNA from single cells (1)
RNA-seq of non coding RNA (1)

Release Date

2023 (15)
2025 (14)
2015 (11)
2012 (11)
2022 (11)
2014 (9)
2019 (7)
2024 (5)
2021 (5)
2018 (5)
2013 (5)
2011 (5)
2009 (5)
2026 (4)
2016 (3)
2020 (3)
2008 (2)
2017 (2)
2010 (1)
2006 (1)
2007 (1)

Lab affiliation

Fondazione IRCCS Policlinico San Matteo (2)
1. School of Natural Sciences, Macquarie University, Sydney, NSW 2109, Australia 2. Institute for Glyco-core Research (iGCORE), Nagoya University, Nagoya, Japan (1)
Departement of Veterinary Medicine and Animal Sciences (1)
Department of Environmental Sciences and Engineering, Gilling's School of Global Public Health, Univeristy of North Carolina at Chapel Hill (1)
Institute for Diabetes and Cancer (IDC), Helmholtz Centre Munich, German Research Center for Environmental Health, Neuherberg, Germany (1)

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Expression of Synj2bp in mouse liver regulates the extent of wrappER-mitochondria contact to maintain hepatic lipid homeostasis.

Not available

S-EPMC9717519 | biostudies-literature

Comprehensive characterization of a floral mutant reveals the mechanism of hooked petal morphogenesis in Chrysanthemum morifolium.

Not available

S-EPMC6835125 | biostudies-literature

Szappanos2011_GeneticInteractionNetwork_YeastMetabolism

This model is from the article: An integrated approach to characterize genetic interaction networks in yeast metabolism Balázs Szappanos, Károly Kovács, Béla Szamecz, Frantisek Honti, Michael Costanzo, Anastasia Baryshnikova, Gabriel Gelius-Dietrich, Martin J Lercher...

2005-01-01 | MODEL1107190000 | BioModels

Validation of blood phosphatidylethanol as an alcohol consumption biomarker in patients with alcohol use disorder and liver disease at a liver transplant center.

Not available

S-EPMC12463739 | biostudies-literature

Impact of Phosphatic Nutrition on Growth Parameters and Artemisinin Production in Artemisia annua Plants Inoculated or Not with Funneliformis mosseae.

Not available

S-EPMC9025405 | biostudies-literature

Targeted sequencing of Cerberus T-cells (Cb-STs) and pentavalent specific T-cells (Penta-STs) targeting CMV, EBV, BKV, adenovirus and Aspergillus fumigatus

Amplicon-based sequencing of Pentavalent specific T-cells (unedited pathogen-specific T-cells targeting CMV, EBV, BKV, adenovirus and Aspergillus fumigatus) and Cerberus T-cells (CRISPR/Cas9 edited Glucocorticoid-resistant T-cells targeting CMV, EBV, BKV, adenovirus and Aspergillus fumigatus) for of...

ORGANISM(S): Homo sapiens

2021-01-14 | E-MTAB-9968 | biostudies-arrayexpress

Off-the-Shelf Virus-Specific T Cells to Treat BK Virus, Human Herpesvirus 6, Cytomegalovirus, Epstein-Barr Virus, and Adenovirus Infections After Allogeneic Hematopoietic Stem-Cell Transplantation.

Not available

S-EPMC5662844 | biostudies-literature

Sublethal effects of a vapour-active pyrethroid, transfluthrin, on Aedes aegypti and Ae. albopictus (Diptera: Culicidae) fecundity and oviposition behaviour.

Not available

S-EPMC6114540 | biostudies-literature

Wolbachia pipientis occurs in Aedes aegypti populations in New Mexico and Florida, USA.

Not available

S-EPMC6540660 | biostudies-literature

Diversity and Genetic Reassortment of Keystone Virus in Mosquito Populations in Florida.