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TranscriptomicsscRNA-seq from Trex1 KO in tumor
Single-cell RNA-seq data for Trex1 WT and KO mice from the tumor. Used for manuscript in submission at Science Advances.
ORGANISM(S): Mus musculus 
2026-03-25 | E-MTAB-16526 | biostudies-arrayexpress
ProteomicsA proteome analysis by LC-MS/MS of human colon mucosal biopsies from gastrointestinal healthy rheumatoid arthritis patients
The joint disease rheumatoid arthritis (RA) is characterized by persistent synovitis, leading to cartilage damage, bone erosion, and ultimately impaired joint function. The disease affects 0.5 to 1.0% of adults in developed countries, and is three times more frequent in women than in men. A number o...
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
2017-04-01 | MSV000080861 | MassIVE
TranscriptomicsGenome-wide analysis of H3K27me3 and H3K4me3 deposition in the fie mutant (h3k27me3_fie_col_seedlings_db)
a2e_fie - h3k27me3_fie_col_seedlings_db - Epigenomic mapping in fie - Genome-wide epigenomic mapping Keywords: chip-chip 4 dye-swap - CATMA arrays
ORGANISM(S): Arabidopsis thaliana 
2011-03-28 | E-GEOD-24159 | biostudies-arrayexpress
TranscriptomicsGenome-wide analysis of H3K27me3 and H3K4me3 deposition in the fie mutant (h3k4me3_fie_col_seedlings_db)
a2e_fie - h3k4me3_fie_col_seedlings_db - Epigenomic mapping in fie - Genome-wide epigenomic mapping Keywords: chip-chip 4 dye-swap - CATMA arrays
ORGANISM(S): Arabidopsis thaliana 
2011-03-28 | E-GEOD-24161 | biostudies-arrayexpress
TranscriptomicsGenome-wide analysis of H3K27me3 and H3K4me3 deposition in the fie mutant (h3k4me3_wt_col_seedlings_db)
a2e_fie - h3k4me3_wt_col_seedlings_db - Epigenomic mapping in fie - Genome-wide epigenomic mapping Keywords: chip-chip 4 dye-swap - CATMA arrays
ORGANISM(S): Arabidopsis thaliana 
2011-03-28 | E-GEOD-24162 | biostudies-arrayexpress
ProteomicsHuman colon biopsies (healthy and Ulcerative Colitis) LC-MS/MS
The etiology of the inflammatory bowel diseases, including ulcerative colitis, remains incomplete, but recent findings points to the involvement of complex host-microbial interactions. We hypothesized that an analysis of the proteins on the host-microbial interacting surface, the intestinal mucosa, ...
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
2017-03-31 | MSV000080833 | MassIVE
MetabolomicsHost-gut microbiota interactions shape parasite infections in farmed Atlantic salmon

Animals and their associated microbiota share long evolutionary histories. However, it is not always clear how host genotype and microbiota interact to affect phenotype. We applied a hologenomic approach to explore how host-microbiota interactions shape lifetime growth and parasite infection in f...

2024-01-24 | MTBLS8575 | MetaboLights
TranscriptomicsGenome-wide analysis of H3K27me3 and H3K4me3 deposition in the fie mutant
This SuperSeries is composed of the SubSeries listed below. Refer to individual Series
ORGANISM(S): Arabidopsis thaliana 
2011-03-28 | E-GEOD-24163 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of human bronchioloalveolar lavage (BAL) not used for diagnostic purposes taken from patients with LF syndrome and SOS of stage II active disease
Cells from bronchioloalveolar lavage (BAL) not used for diagnostic purpose were taken from patients with LF syndrome and SOS of stage II active disease. The SOS samples were divided in two groups by the means of CD4+-/CD8+-cell ratio < 5 or > 5, respectively. At least five samples of each group were...
ORGANISM(S): Homo sapiens 
2007-04-25 | E-RZPD-23 | biostudies-arrayexpress
UnknownAn optimized MALDI MSI protocol for spatial detection of tryptic peptides in fresh frozen prostate tissue.
Not available
S-EPMC9285595 | biostudies-literature
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