Andrews S S - OmicsDI

Show results for

Unknown (3358)
Transcriptomics (143)
Proteomics (64)
Genomics (53)
Metabolomics (3)
Models (2)

Organisms

Mus musculus (65)
Aerococcus urinae NBRC 15544 = CCUG 36881 (59)
Alteromonadales (59)
Homo sapiens (57)
Drosophila melanogaster (22)
Daphnia pulex (9)
Salmo salar (3)
Caenorhabditis elegans (3)
Saccharomyces cerevisiae (3)
Onthophagus taurus (2)
Schizosaccharomyces pombe (2)
Rattus norvegicus (2)
Danio rerio (2)
Arabidopsis thaliana (2)
Severe acute respiratory syndrome-related coronavirus (1)
Escherichia coli (1)
Leishmania amazonensis (1)
Triticum turgidum subsp. durum (1)
Tetrahymena thermophila (1)
Tribolium castaneum (1)
Catharanthus roseus (1)
Pan troglodytes (1)
Brassica napus (1)
Equus caballus (1)
Zea mays (1)
Hordeum vulgare (1)
Solanum tuberosum (1)
Oryza sativa Japonica Group (1)
Sus scrofa (1)
Rattus rattus (1)

Organisms

Homo sapiens (4)
Streptomyces calvus (1)
Saccharomyces cerevisiae (1)
Pseudomonas aeruginosa PA14 (1)
Staphylococcus aureus (1)

Repository

biostudies-arrayexpress (174)
pride (59)
ENA (15)
EGA (8)
MetaboLights (3)
BioModels (2)
iProX (2)
MassIVE (2)
geo (1)

Tissue

Cell culture (13)
Brain (8)
Epithelial cell (7)
Blood plasma (3)
Permanent cell line cell (3)
B cell (2)
Fibroblast (2)
Flight muscle (2)
Blood (1)
Blood cell (1)
Blood serum (1)
Cell suspension culture (1)
Colon (1)
Dendritic cell (1)
Diploid cell (1)
Early embryonic cell (1)
Embryonic stem cell (1)
Gut epithelium (1)
Hypophysis (1)
JURKAT cell (1)
Lymph node (1)
Macrophage (1)
Plant cell (1)
Raphe nuclei (1)
Rheumatoid arthritis disease specific synovial fluid (1)
Seed (1)
Skeletal muscle (1)
Skin (1)
Spleen (1)
T cell (1)

Disease

Chronic myeloid leukemia (3)
Breast cancer (2)
Colon cancer (2)
Disease free (2)
Not applicable (1)
Murine hemochromatosis (1)
Murine hereditary hemochromatosis (1)
Acute leukemia (1)
Adenocarcinoma (1)
Alzheimer's disease (1)
Cell type cancer (1)
Chronic kidney disease (1)
Hidradenitis suppurativa (1)
Melanoma (1)
Melanomatosis (1)
Mental depression (1)
Multiple myeloma (1)
Muscular atrophy (1)
Neuroblastoma (1)
Parkinson's disease (1)
Toxoplasmosis (1)
Wounds and Injuries (1)

Technology Type

Mass Spectrometry (59)
Shotgun proteomics (31)
Bottom-up proteomics (11)
SWATH MS (7)
Data-dependent acquisition (6)
Data-independent acquisition (4)
Affinity purification coupled with mass spectrometry proteomics (3)
Chemical cross-linking coupled with mass spectrometry proteomics (3)
Mass spectrometry (2)
Illumina HiSeq 2500, ILLUMINA (1)
NMR spectroscopy (1)
Gel-based experiment (1)
Mass spectrometry imaging (1)
Sodium dodecyl sulfate polyacrylamide gel electrophoresis (1)
Top-down proteomics (1)

Instrument Platform

Illumina HiSeq 2500 (13)
Illumina NovaSeq 6000 (11)
Illumina HiSeq 4000 (7)
Illumina HiSeq 2000 (6)
NextSeq 550 (4)
NextSeq 500 (4)
NextSeq 2000 (3)
Sony SH800 (2)
Illumina BeadArray reader (2)
Illumina HiSeq 1000 (2)
Illumina MiSeq (2)
Q Exactive (2)
Eppendorf EpMotion 5073m pipetting robot (1)
STAR (1)
Single Cell/Low Input RNA Library Prep Kit for Illumina (#E6420S, New England Biolabs) (1)
RNA Micro Kit (Qiagen). (1)
Qiagen RNAeasy, Bioanalyzer QubitFluorometer, Agilent 2100, RNA Pico 6000 chip (1)
MACS (1)
Agilent 2100 Bioanalyzer, Applied Biosystems 7900HT Sequence Detection System, Illumina TruSeq Small RNA Sample Preparation Kit (1)
RNeasy mini Kit, Ribo-Zero Human/Mouse/Rat kit (1)
Illumina Genome Analyzer Iix (1)
Microcentrifuge (1)
Illumina HiScanSQ (1)
Agilent 2100 Bioanalyzer (1)
Illumina Genome Analyzer II (1)
Illumina NovaSeq X (1)
Illumina HiSeq X (1)
DNBSEQ-G400 (1)
Direct infusion MS - negative (1)
Direct infusion MS - positive (1)

Publication Date

2022 (22)
2010 (21)
2025 (18)
2015 (16)
2011 (16)
2024 (15)
2012 (15)
2014 (13)
2013 (13)
2020 (12)
2023 (11)
2026 (10)
2019 (10)
2021 (9)
2016 (9)
2017 (8)
2009 (8)
2018 (6)
2007 (3)
2008 (2)
2006 (2)
2004 (2)
2005 (1)
2002 (1)

CHEBI ID

CHEBI:26271 (2)
CHEBI:22660 (2)
CHEBI:27570 (2)
CHEBI:18186 (2)
CHEBI:26986 (2)
CHEBI:16811 (2)
CHEBI:28300 (2)
CHEBI:24898 (2)
CHEBI:25017 (2)
CHEBI:28044 (2)
CHEBI:27266 (2)
CHEBI:29016 (2)
CHEBI:16704 (2)
CHEBI:15891 (2)
CHEBI:25094 (2)
CHEBI:6650 (2)
CHEBI:18237 (2)
CHEBI:17568 (2)
CHEBI:15741 (2)
CHEBI:15611 (2)
CHEBI:32816 (2)
CHEBI:78320 (2)
CHEBI:18012 (2)
CHEBI:22653 (2)
CHEBI:16449 (2)
CHEBI:27897 (2)
CHEBI:17596 (2)
CHEBI:17368 (2)
CHEBI:77846 (1)
CHEBI:16132 (1)

Metabolite Name

Uracil M+4 (1)
Uracil M+3 (1)
Uracil M+2 (1)
Uracil M+1 (1)
Uracil M+0 (1)
Adenine M+5 (1)
Adenine M+4 (1)
Adenine M+3 (1)
Adenine M+2 (1)
Adenine M+1 (1)
Adenine M+0 (1)
Uridine M+9 (1)
Uridine M+8 (1)
Uridine M+7 (1)
Uridine M+6 (1)
Uridine M+5 (1)
Uridine M+4 (1)
Uridine M+3 (1)
Uridine M+2 (1)
Uridine M+1 (1)
Uridine M+0 (1)
Adenosine M+10 (1)
Adenosine M+9 (1)
Adenosine M+8 (1)
Adenosine M+7 (1)
Adenosine M+6 (1)
Adenosine M+5 (1)
Adenosine M+4 (1)
Adenosine M+3 (1)
Adenosine M+2 (1)

First Public Date

2019 (4)
2021 (3)
2026 (2)
2024 (2)
2022 (1)
2018 (1)
2017 (1)
2015 (1)

Modelling Approach

Computational model (2)

Lab affiliation

Cornell University Department of Microbiology (3)
STORM Therapeutics Limited, Cambridge, United Kingdom (3)
1VIB Center for Medical Biotechnology, VIB, Ghent, 9052, Belgium 2Department of Biomolecular Medicine, Ghent University, Ghent, 9052, Belgium (2)
School of Medicine, University College Dublin, Belfield, Dublin 4, Ireland (2)
School of Medicine, University of St Andrews, St Andrews, KY16 9TF, UK (2)
Target discovery Institute (2)
1 Department of Molecular Neurosciences, Center for Brain Research, Medical University of Vienna, Spitalgasse 4, A-1090 Vienna, Austria; 2 Department of Neuroscience, Karolinska Institutet, Retzius väg 8, SE-17177 Stockholm, Sweden (1)
1 VIB Center for Medical Biotechnology, VIB, Ghent, East Flanders, 9052, Belgium 2 Department of Biomolecular Medicine, Ghent University, Ghent, East Flanders, 9052, Belgium (1)
1,College of Veterinary Medicine, Northwest A&F University, Yangling, Shaanxi 712100, China 2,Key Laboratory of Animal Biotechnology, Ministry of Agriculture, Northwest A&F University, Yangling, Shaanxi 712100, China (1)
Assistant Professor, Chemistry and Biochemistry, Biological Chemistry Member, Biochemistry, Biophysics & Structural Biology GPB Home Area (lab head) (1)
BSRC, University of St Andrews, UK (1)
Babraham Institute (1)
Biomedical Sciences Research Complex University of St Andrews (1)
Biomedical Sciences Research Complex, University of St Andrews (1)
Boston University School of Medicine Center for Biomedical Mass Spectrometry (1)
College of Veterinary Medicine, The state Key Laboratory of Agricultural Microbiology, Cooperative Innovation Center of Substantial Pig Production, Wuhan, 433070, China (1)
Conway Institute Research Fellow Special Lecturer in Clinical Pharmacology School of Medicine, University College Dublin, Belfield, Dublin 4, Ireland. (1)
Department of Chemistry University of Nebraska-Lincoln Lincoln, NE 68588 USA (1)
Department of Molecular Neurosciences, Center for Brain 1099 Research, Medical University of Vienna, Vienna, Austria (1)
Epigenetics Programme, Babraham Institute, Cambridge CB22 3AT, United Kingdom (1)
Faculty of Life Sciences, University of Dundee (1)
Hong Kong Baptist University (1)
Imperial College London (1)
Institute of Molecular Systems Biology, ETH Zürich, Switzerland (1)
Institute of Science and Technology in Medicine, Keele Univeristy, Keele, Staffordshire, UK Robert Jones and Agnes Hunt Orthopaedic Hospital, Oswestry, Shropshire, UK (1)
Lab Head, UQ Diamantina Institute,The University of Queensland (1)
MRC Laboratory of Molecular Biology (1)
Mass Spectrometry Facility Barts Cancer Institute Queen Mary, University of London John Vane Science Centre, Charterhouse Square, London EC1M 6BQ (1)
Max-Delbrück Center for Molecular Medicine (MDC) Robert-Rössle-Str. 10, 13125 Berlin, Germany (1)
Nichollas E. Scott, PhD ARC Future Fellow and Group Leader The Department of Microbiology and Immunology Level 6 - Peter Doherty Institute | The University of Melbourne | Vic | 3000 | Australia (1)