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TranscriptomicsComparison of the expression profiles of 630E JIR8094 strain and a ccpA mutant after 10h of growth in TY.
Transcriptionnal profiling of C. difficile 630E JIR8094 strain vs a ccpA mutant after 10h of growth in TY two-conditions experiments, WT strain vs ccpA mutant strain, 4 biological replicates for each condition, in an indirect design using a 8h TY RNA preparation as Reference
ORGANISM(S): [Clostridium] difficile 
2012-10-02 | E-GEOD-35071 | biostudies-arrayexpress
TranscriptomicsComparison of the expression profiles of 630E JIR8094 strain and a ccpA mutant after 10h of growth in TY with 0.5% glucose.
Transcriptionnal profiling of C. difficile 630E JIR8094 strain vs a ccpA mutant after 10h of growth in TY with 0.5% glucose two-conditions experiments, WT strain vs ccpA mutant strain, 4 biological replicates for each condition, in an indirect design using a 8h TY RNA preparation as Reference
ORGANISM(S): [Clostridium] difficile 
2012-10-02 | E-GEOD-35070 | biostudies-arrayexpress
TranscriptomicsClostridium difficile CD630E JIR8094: growth 10h with 0.5% glucose in TY vs growth 10h in TY
transcriptionnal profiling of a C. difficile strain JIR8094 comparing growth 10h in 0.5% TY medium with growth 10h in TY medium two-conditions experiments, 0.5% glucose TY for 10h vs TY for 10h, 4 biological replicates for each condition, in an indirect design using a 8h TY RNA preparation as Refere...
ORGANISM(S): [Clostridium] difficile 
2012-10-02 | E-GEOD-35072 | biostudies-arrayexpress
TranscriptomicsClostridium difficile mutant ccpA CD630E JIR8094: growth 10h with 0.5% glucose in TY vs growth 10h in TY
transcriptionnal profiling of a ccpA mutant of C. difficile strain JIR8094 comparing growth 10h in 0.5% TY medium with growth 10h in TY medium two-conditions experiments, 0.5% glucose TY for 10h vs TY for 10h, 4 biological replicates for each condition, in an indirect design using a 8h TY RNA prepar...
ORGANISM(S): [Clostridium] difficile 
2012-10-02 | E-GEOD-35073 | biostudies-arrayexpress
UnknownThe role of Xist-mediated Polycomb recruitment in the initiation of X-chromosome inactivation
Not available
S-SCDT-EMBOR-2019-48019V1 | biostudies-other
TranscriptomicsTranscriptional profiling of wild-type parent MC58 strain and ptsH knock-out mutant in Neisseria meningitidis
In order to assess global differences in gene expression that may be regulated directly or indirectly by HPr , a global transcriptomic profile analysis of the ΔptsH mutant and the wild-type MC58 strain was performed. cDNA probes were prepared from RNA pools (5 μg) obtained from MC58 wild-type and ...
ORGANISM(S): Neisseria meningitidis MC58 
2016-10-03 | E-MTAB-4997 | biostudies-arrayexpress
TranscriptomicsWhole genome transcription profiling of the L5 spinal nerve transection model of neuropathic pain in the rat, at different sequencing depths (RNA-Seq)
Poly(A) enriched RNA derived from the L5 DRG 7 days following L5-SNT and from naïve L5-DRG tissue was subjected to RNA-seq analysis at different sequencing depths 6 biological replicates (3 case – SNT subjected L5-DRG tissue, 3 control – naïve L5-DRG tissue). Each biological replicate was divided B4...
ORGANISM(S): Rattus norvegicus 
2014-01-07 | E-GEOD-53762 | biostudies-arrayexpress
TranscriptomicsGenome-wide Transcriptional Profiling of Skin and Dorsal Root Ganglia after Ultraviolet-B-Induced Inflammation
Ultraviolet-B (UVB) irradiation of the skin was performed on rat (skin and DRG) and human (skin) tissue. The resulting changes in gene expression were then profiled by using RNA-seq to compare gene expression between irradiated and non-irradiated samples Poly(A) selected RNA was sequenced for 5 irra...
ORGANISM(S): Homo sapiens 
2014-03-01 | E-GEOD-54413 | biostudies-arrayexpress
TranscriptomicsWhole genome transcription profiling of the L5 spinal nerve transection model of neuropathic pain in the rat, at different sequencing depths (Affymetrix exon-level)
RNA derived from the L5 DRG 7 days following L5-SNT and from naïve L5-DRG tissue was subjected to microarray analysis and expression was determined at the exon and gene level 6 biological replicates (3 case – SNT subjected L5-DRG tissue, 3 control – naïve L5-DRG tissue). Each sample was made from po...
ORGANISM(S): Rattus norvegicus 
2014-01-07 | E-GEOD-53860 | biostudies-arrayexpress
TranscriptomicsWhole genome transcription profiling of the L5 spinal nerve transection model of neuropathic pain in the rat, at different sequencing depths (Affymetrix transcript-level)
RNA derived from the L5 DRG 7 days following L5-SNT and from naïve L5-DRG tissue was subjected to microarray analysis and expression was determined at the exon and gene level 6 biological replicates (3 case – SNT subjected L5-DRG tissue, 3 control – naïve L5-DRG tissue). Each sample was made from po...
ORGANISM(S): Rattus norvegicus 
2014-01-07 | E-GEOD-53764 | biostudies-arrayexpress
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