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TranscriptomicsBlood RNA sequencing was performed on a cohort of adults attending the Emergency Department with suspected infection who had subsequently-confirmed viral, bacterial, or no infection diagnoses
The cohort comprised patients recruited between August 2014 - April 2017. It includes patients with bacteremia, positive viral diagnostic test in the context of acute admission and those with no positive microbial diagnostic test, no infection-related ICD-10 diagnostic codes, and no empirical antivi...
ORGANISM(S): Homo sapiens 
2021-08-11 | E-MTAB-10527 | biostudies-arrayexpress
GenomicsHost genotyping data from Dutch adult bacterial meningitis patients and linked bacterial genome sequences
Streptococcus pneumoniae is a common nasopharyngeal colonizer, but can also cause life-threatening invasive diseases such as empyema, bacteremia and meningitis. Genetic variation of host and pathogen is known to play a role in invasive pneumococcal disease, though to what extent is unknown. This st...
EGAS00001005993 | EGA
UnknownBacterial Community Modifies Host Genetics Effect on Early Childhood Caries.
Not available
S-EPMC10552462 | biostudies-literature
UnknownBacterial community modifies host genetics effect on early childhood caries.
Not available
S-EPMC10120800 | biostudies-literature
UnknownA quantitative test of population genetics using spatiogenetic patterns in bacterial colonies.
Not available
S-EPMC3385003 | biostudies-literature
GenomicsNext Gen(etics): targeted genome enrichment and next-generation sequencing enhances phenotype-driven forward genetics and gene-driven reverse genetics
Targeted genomic enrichment followed by next-generation sequencing dramatically increased the efficiency of mutation discovery in human genomes. Here we demonstrate that these techniques also revolutionize traditional genetic approaches in model systems. We developed a two-step protocol utilizing a ...
ORGANISM(S): Rattus norvegicus 
2010-09-12 | E-GEOD-22024 | biostudies-arrayexpress
ProteomicsDual-species proteomic analysis of Pseudomonas aeruginosa and human airway epithelial cells during bacterial adhesion and intracellular infection
Pseudomonas aeruginosa can adhere to and be internalized by airway epithelial cells, but the host and bacterial responses during bacterial adhesion and intracellular infection remain incompletely understood. In this study, we characterized the proteomes of P. aeruginosa PAO1 and CuFi-5 human airway ...
ORGANISM(S): Homo sapiens (Human) Pseudomonas aeruginosa 
2026-08-07 | PXD081656 | Pride
Cufi-5 Airway epithelial cells Pseudomonas aeruginosa Host–pathogen interaction 
UnknownFilling gaps in bacterial amino acid biosynthesis pathways with high-throughput genetics.
Not available
S-EPMC5764234 | biostudies-literature
UnknownEstablishment of a Simple and Efficient Reverse Genetics System for Canine Adenoviruses Using Bacterial Artificial Chromosomes.
Not available
S-EPMC7412426 | biostudies-literature
UnknownInfluence of host genetics in shaping the rumen bacterial community in beef cattle.
Not available
S-EPMC7493918 | biostudies-literature
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