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TranscriptomicsSystematic identification of balanced transposition polymorphisms in Saccharomyces cerevisiae
High-throughput techniques for detecting DNA polymorphisms generally do not identify changes in which the genomic position of a sequence, but not its copy number, varies among individuals. To explore such balanced structural polymorphisms, we used array-based Comparative Genomic Hybridization (aCGH)...
ORGANISM(S): Saccharomyces cerevisiae 
2010-05-19 | E-GEOD-14223 | biostudies-arrayexpress
GenomicsEffects of Histone H3 depletion on nucleosome occupancy and positioning through the S. cerevisiae genome [single-end MNase-seq]
Experiments performed over the past three decades have shown that nucleosomes are transcriptional repressors. In Saccharomyces cerevisiae, depletion of histone H4 results in the genome-wide transcriptional de-repression of hundreds genes. The mechanism of de-repression is hypothesized to be rooted d...
ORGANISM(S): Saccharomyces cerevisiae 
2012-09-26 | E-GEOD-29291 | biostudies-arrayexpress
TranscriptomicsEffects of Histone H3 depletion on nucleosome occupancy and positioning through the S. cerevisiae genome [RNA_seq]
Experiments performed over the past three decades have shown that nucleosomes are transcriptional repressors. In Saccharomyces cerevisiae, depletion of histone H4 results in the genome-wide transcriptional de-repression of hundreds genes. The mechanism of de-repression is hypothesized to be rooted d...
ORGANISM(S): Saccharomyces cerevisiae 
2012-09-26 | E-GEOD-29293 | biostudies-arrayexpress
MetabolomicsDissolved organic carbon compounds in deep-sea hydrothermal vent fluids from the East Pacific Rise at 9°50′N

Deep-sea hydrothermal vents are unique ecosystems that may release chemically distinct dissolved organic matter to the deep ocean. Here, we describe the composition and concentrations of polar dissolved organic compounds observed in low and high temperature hydrothermal vent fluids at 9°50′N on t...

2017-05-23 | MTBLS428 | MetaboLights
TranscriptomicsThe S. cerevisiae histone demethylase Jhd1 fine-tunes the distribution of H3K36me2
Histone methylation plays important roles in the regulation of chromatin dynamics and transcription. Steady state levels of histone lysine methylation are regulated by a balance between enzymes that catalyze either the addition or removal of methyl groups. Using an activity-based biochemical approac...
ORGANISM(S): Saccharomyces cerevisiae 
2010-06-11 | E-GEOD-7627 | biostudies-arrayexpress
TranscriptomicsMeiotic time-course expression profile
To investigate the dynamics of the meiotic transcriptome and to ensure meiotic synchrony of our samples, we measured RNA abundance in vegetative cells, respiratory (pre-meiotic) cells and in synchronously sporulating cells at various times after transfer to sporulation media (SM). SK1 yeast strain S...
ORGANISM(S): Saccharomyces cerevisiae SK1 
2010-05-22 | E-GEOD-18181 | biostudies-arrayexpress
TranscriptomicsMeiotic time course: open chromatin and expression profile
This SuperSeries is composed of the following subset Series: GSE16163: Meiotic time course of open chromatin as measured by FAIRE GSE18181: Meiotic time course expression profile Refer to individual Series
ORGANISM(S): Saccharomyces cerevisiae SK1 
2009-09-25 | E-GEOD-18256 | biostudies-arrayexpress
GenomicsGenome-wide nucleosome occupancy profiling by high throughput sequencing, and microarray analysis of RNA abundance
We profiled nucleosome occupancy of different developmental stages in C. elegans. Mononucleosomal DNA was sequenced by Illumina paired-end sequencing. We used embryos, germlineless adults, germ line containing adults, and XO hermaphrodites at L3 larval stage. RNA abundance is determined by microarra...
ORGANISM(S): Caenorhabditis elegans 
2010-03-02 | E-GEOD-20136 | biostudies-arrayexpress
UnknownDevelopment of a Definition of Postacute Sequelae of SARS-CoV-2 Infection.
Not available
S-EPMC10214179 | biostudies-literature
UnknownDifferentiation of Prior SARS-CoV-2 Infection and Postacute Sequelae by Standard Clinical Laboratory Measurements in the RECOVER Cohort.
Not available
S-EPMC11408082 | biostudies-literature
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