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ProteomicsBANP is an essential transcription factor that opens chromatin and activates CpG island regulated genes
While the majority of RNA polymerase II initiation events in mammalian genomes take place within CpG island (CGI) promoters, our understanding of their regulation remains limited. Here we combine single-molecule footprinting with interaction proteomics to identify BANP as a critical CGI regulator an...
ORGANISM(S): Mus musculus (Mouse) 
2021-06-16 | PXD024794 | Pride
Cpg island Single-molecule footprinting Cgi promoters Banp Tf binding Paqman 
GenomicsBANP opens chromatin and activates CpG island regulated genes [ChIP-Seq]
BANP opens chromatin and activates CpG island regulated genes [ChIP-Seq]
PRJNA650491 | ENA
GenomicsBANP opens chromatin and activates CpG island regulated genes [ATAC-Seq]
BANP opens chromatin and activates CpG island regulated genes [ATAC-Seq]
PRJNA650492 | ENA
GenomicsBANP opens chromatin and activates CpG island regulated genes [MNase-seq]
BANP opens chromatin and activates CpG island regulated genes [MNase-seq]
PRJNA652005 | ENA
GenomicsBANP opens chromatin and activates CpG island regulated genes [SLAM-Seq]
BANP opens chromatin and activates CpG island regulated genes [SLAM-Seq]
PRJNA650408 | ENA
GenomicsBANP opens chromatin and activates CpG island regulated genes [RNA-Seq]
BANP opens chromatin and activates CpG island regulated genes [RNA-Seq]
PRJNA655153 | ENA
UnknownBanp regulates DNA damage response and chromosome segregation during the cell cycle in zebrafish retina.
Not available
S-EPMC9363121 | biostudies-literature
UnknownStructural insights into DNA recognition by the BEN domain of the transcription factor BANP.
Not available
S-EPMC10206803 | biostudies-literature
UnknownCircular BANP knockdown inhibits the malignant progression of residual hepatocellular carcinoma after insufficient radiofrequency ablation.
Not available
S-EPMC9532039 | biostudies-literature
Methylation profilingBANP opens chromatin and activates CpG island regulated genes [MNase-seq]
In mammalian genomes, the vast majority of RNA polymerase II initiation events take place at CpG island promoters. Despite their relevance our understanding of their regulation remains limited. Here we identify Banp as the long sought-after TF that binds the orphan CGCG element in CpG islands by com...
ORGANISM(S): Mus musculus 
2021-05-17 | GSE155600 | GEO
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