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TranscriptomicsTranscriptome analysis of the archaeon Thermoplasma acidophilum cultured under aerobic and anaerobic conditions
Investigation of whole genome gene expression level changes in Thermoplasma acidophilum cultured under aerobic and anaerobic conditions. The analysis are further described in Na Sun, Cuiping Pan, Stephan Nickell, Matthias Mann, Wolfgang Baumeister, and István Nagy, Quantitative proteome and transcri...
ORGANISM(S): Thermoplasma acidophilum DSM 1728 
2011-09-26 | E-GEOD-21956 | biostudies-arrayexpress
ProteomicsAutophagy preferentially degrades non-fibrillar polyQ aggregates
Aggregation of proteins containing expanded polyglutamine (polyQ) repeats is the cytopathologic hallmark of a group of dominantly inherited neurodegenerative diseases, including Huntington's disease (HD). Huntingtin (Htt), the disease protein of HD, forms amyloid-like fibrils by liquid-to-solid phas...
ORGANISM(S): Mus musculus (Mouse) Homo sapiens (Human) 
2026-10-23 | PXD044261 | Pride
Autophagosome Human hek293 Mouse neuro2a Poly-glutamine Huntingtin 
ProteomicsDirect visualization of ERAD nanocompartments within the cell
ER-associated degradation (ERAD) is an evolutionarily-conserved quality control mechanism where misfolded proteins are removed from the endoplasmic reticulum (ER) and degraded by the ubiquitin-proteasome system. While many ERAD-mediating proteins have been identified, it is unknown how they are spat...
ORGANISM(S): Chlamydomonas reinhardtii 
2020-05-26 | PXD009375 | Pride
Erad electron microscopy 
ProteomicsIdentification of microtubule associated proteins
To find out the identities of microtubule-associated proteins whose abundances are visibly reduced in presence of Taxol. For this experiment, microtubule-associated proteins are pulleddown after treatment with Taxol. Untreated cells are used as a control.
ORGANISM(S): Homo sapiens (Human) 
2025-05-06 | PXD035700 | Pride
Microtubule associated proteins  human  mitosis 
UnknownCryo-electron tomography of rod outer segments in ABCA4 knockout mice acquired with Volta phase plate in focus
Not available
EMPIAR-10771 | biostudies-other
UnknownCryo-electron tomography of rod outer segments in wild type mice acquired with Volta Phase Plate in focus
Not available
EMPIAR-10772 | biostudies-other
UnknownCryo-electron tomography of rod outer segments in wild type mice acquired conventionally with defocus
Not available
EMPIAR-10773 | biostudies-other
UnknownSensory salience processing moderates attenuated gazes on faces in autism spectrum disorder: a case-control study.
Not available
S-EPMC9912590 | biostudies-literature
UnknownIn situ cryo-electron tomography of autophagic structures in S. cerevisiae
Not available
EMPIAR-11166 | biostudies-other
ProteomicsStructure and Topography of the Synaptic V-ATPase–Synaptophysin Complex
Synaptic vesicles are organelles with a precisely defined protein and lipid composition, yet the molecular mechanisms for the biogenesis of synaptic vesicles are mainly unknown. Here, we discovered a well-defined interface between the synaptic vesicle V-ATPase and synaptophysin by in situ cryo-elect...
ORGANISM(S): Mus Musculus 
PXD052814 |
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