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GenomicsBead-beating method development and optimisation
Optimisation of a bead-beating procedure for simultaneous extraction of bacterial and fungal DNA from pig faeces and liquid feed for 16S and ITS2 rDNA amplicon sequencing
PRJEB49004 | ENA
UnknownImproved detection of DNA Schistosoma haematobium from eggs extracted by bead beating in urine.
Not available
S-EPMC6349810 | biostudies-literature
UnknownImpact of Bead-Beating Intensity on the Genus- and Species-Level Characterization of the Gut Microbiome Using Amplicon and Complete 16S rRNA Gene Sequencing.
Not available
S-EPMC8517478 | biostudies-literature
ProteomicsProcess and Workflow for Preparation of Disparate Mouse Tissues for Proteomic Analysis
We investigated the effect of homogenization strategy and protein precipitation on downstream protein quantitation using multiple reaction monitoring mass spectrometry (MRM-MS). Our objective was to develop a workflow capable of processing disparate tissue types with high throughput, minimal variabi...
ORGANISM(S): Mus Musculus 
2021-01-24 | PXD019539 | panorama
Genomics
Impact of bead-beating intensity on gut microbiome detection by 16S sequencing
PRJNA685188 | ENA
Genomics
Impact of bead-beating time on microbiome recovery in mouse and human stool-16S sequencing data
PRJNA625828 | ENA
UnknownImproved diagnosis of Trichuris trichiura by using a bead-beating procedure on ethanol preserved stool samples prior to DNA isolation and the performance of multiplex real-time PCR for intestinal parasites.
Not available
S-EPMC5471844 | biostudies-literature
ProteomicsEvaluating the protein extraction methods for gut metaproteomics
Human stool samples were collected, microbial cells were harvested and subjected to protein extraction using different protocols for metaproteomics analyses. The protein extraction methods differ from the usage of different lysis buffer (SDS, urea and commercially available B-Per reagent), bead beat...
ORGANISM(S): human gut metagenome 
2017-07-17 | PXD005969 | Pride
Protein extraction Metaproteomics Microbiome Bead beating Ultrasonication 
UnknownA new index for characterizing micro-bead motion in a flow induced by ciliary beating: Part I, experimental analysis.
Not available
S-EPMC5510807 | biostudies-literature
UnknownMultiplex detection of bacteria on an integrated centrifugal disk using bead-beating lysis and loop-mediated amplification.
Not available
S-EPMC5431220 | biostudies-literature
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