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TranscriptomicsExpression quantitative trait loci (eQTL) analysis of Brassica rapa under varying soil phosphorus (P) supplies
The aim of this study was to identify eQTL in Brassica rapa grown under altered soil phosphorus (P) supply, to understand better the genetic architecture of P-use efficiency (PUE) in plants. Recombinant inbred lines (RILs) of the BraIRRI mapping population were grown at adequate and growth-limiting ...
ORGANISM(S): Brassica rapa 
2011-06-29 | E-GEOD-27052 | biostudies-arrayexpress
TranscriptomicsLongSAGE transcriptome profiling in the widespread marine coccolithophore Emiliania huxleyi
The abundant and widespread coccolithophore Emiliania huxleyi plays an important role in mediating CO2 exchange between the ocean and the atmosphere through its impact on marine photosynthesis and calcification. Here, we use long serial analysis of gene expression (SAGE) to identify E. huxleyi genes...
ORGANISM(S): Emiliania huxleyi CCMP1516 
2007-07-07 | E-GEOD-8376 | biostudies-arrayexpress
ProteomicsGlycogen synthesis jump-starts photosynthesis through the G6P shunt in cyanobacteria
Proteomics analysis on Synechococcus elongatus PCC 7942 wild type and glycogen mutant cells. Cells growing under the light and dark incubated cells were analyzed for their protein abundance profile.
ORGANISM(S): Synechococcus Elongatus Pcc 7942 (ncbitaxon:1140) 
2019-03-14 | MSV000083575 | MassIVE
TranscriptomicsGene expression profile of rice shoot in response to macronutrient deficiency
Macronutrients are pivotal elements for proper plant growth and development. We performed microarray analysis of rice shoot under nitrogen (N), phosphorus (P), and potassium (K) deficiency conditions to obtain a global view of gene regulations associated with plant response to essential nutrients. W...
ORGANISM(S): Oryza sativa Japonica Group 
2015-08-12 | E-GEOD-66935 | biostudies-arrayexpress
TranscriptomicsTranscriptome analysis of Arabidopsis colonized by a plant-growth promoting rhizobacterium
Transcriptome analysis of Arabidopsis colonized by a plant-growth promoting rhizobacterium reveals a general effect on disease resistance RNA transcript levels of Arabidopsis plants, infected by the rhizobacterium Pseudomonas thivervalensis (strain MLG45), and axenic control plants were compared us...
ORGANISM(S): Arabidopsis thaliana 
2005-12-20 | E-GEOD-3885 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of Arabidopsis colonized by a plant-growth promoting rhizobacterium
Transcriptome analysis of Arabidopsis colonized by a plant-growth promoting rhizobacterium reveals a general effect on disease resistance RNA transcript levels of Arabidopsis plants, infected by the rhizobacterium Pseudomonas thivervalensis (strain MLG45), and axenic control plants were compared us...
ORGANISM(S): Arabidopsis thaliana 
2005-10-14 | E-SMDB-2344 | biostudies-arrayexpress
TranscriptomicsPtrA is required for coordinate regulation of gene expression during phosphate depletion in a marine Synechococcus
The genome of the marine Synechococcus sp. WH8102 displays a minimal regulatory network yet physiological and molecular responses of this organism are tuned to episodic limitation for nitrogen and phosphorus. Microarray analyses have demonstrated a key role for the two-component regulatory system, P...
ORGANISM(S): Synechococcus sp. WH 8102 
2010-04-08 | E-GEOD-18511 | biostudies-arrayexpress
UnknownPhase I trial of lenalidomide and CCI-779 in patients with relapsed multiple myeloma: evidence for lenalidomide-CCI-779 interaction via P-glycoprotein.
Not available
S-EPMC3164245 | biostudies-literature
TranscriptomicsA Genome-Wide Characterization of New and Drought Stress Responsive MicroRNAs in Populus euphratica
We present an efficient method to genome-wide discover new and drought stress responsive miRNAs in P. euphratica. High throughput sequencing of P. euphratica leaves found 197 conserved miRNAs between P. euphratica and Populus trichocarpa. Meanwhile, 189 new miRNAs which belonged to 120 families were...
ORGANISM(S): Populus euphratica 
2011-04-25 | E-GEOD-25747 | biostudies-arrayexpress
TranscriptomicsTranscriptome dynamics during the transition from anaerobic photosynthesis to aerobic respiration in R. sphaeroides
we performed time series microarray analyses to investigate transcriptome dynamics during the transition from anaerobic photosynthesis to aerobic respiration. Published on J. Bacteriol., 190 (1), 286-299, 2008. Major changes in gene expression profiles occurred in the initial 15 min after the shift ...
ORGANISM(S): Rhodobacter sphaeroides 2.4.1 
2008-07-28 | E-GEOD-12269 | biostudies-arrayexpress
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