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ProteomicsPacific Ocean metaproteomics, METZYME KM1128
Global metaproteomic analyses of microbial biomass from the upper water column of the Central Pacific Ocean. This dataset was used as a discovery dataset to identify peptide biomarkers for cyanobacterial populations for use in targeted metaproteomic calibrated multiple reaction monitoring (MRM) anal...
ORGANISM(S): Environmental Samples (ncbitaxon:318178) 
2021-11-05 | MSV000088323 | MassIVE
TranscriptomicsVitamin D Prevents Cognitive Decline and Enhances Hippocampal Synaptic Function in Aging Rats
Vitamin D is an important calcium-regulating hormone with diverse functions in numerous tissues including the brain. Increasing evidence suggests that vitamin D may play a role in maintaining cognitive function and that vitamin D deficiency may accelerate age-related cognitive decline. Using aging...
ORGANISM(S): Rattus norvegicus 
2014-09-23 | E-GEOD-61326 | biostudies-arrayexpress
TranscriptomicsRNA-seq: Temporal dynamics and developmental memory of 3D chromatin architecture at Hox gene loci
Hox genes are essential regulators of embryonic development. They are activated in a temporal sequence following their topological order within their genomic clusters. Subsequently, states of activity are fine-tuned and maintained to translate into domains of progressively overlapping gene products....
ORGANISM(S): Mus musculus 
2014-04-28 | E-GEOD-54952 | biostudies-arrayexpress
UnknownFrom pairs of most similar sequences to phylogenetic best matches.
Not available
S-EPMC7147060 | biostudies-literature
GenomicsChIP-seq: Temporal dynamics and developmental memory of 3D chromatin architecture at Hox gene loci
Hox genes are essential regulators of embryonic development. They are activated in a temporal sequence following their topological order within their genomic clusters. Subsequently, states of activity are fine-tuned and maintained to translate into domains of progressively overlapping gene products....
ORGANISM(S): Mus musculus 
2014-04-28 | E-GEOD-54955 | biostudies-arrayexpress
ProteomicsSeptin 7 Interacts With Numb To Preserve Sarcomere Structural Organization And Muscle Contractile Function
Here, we investigated mechanisms by which aging-related reductions of the levels of Numb in skeletal muscle fibers contribute to loss of muscle strength and power, two critical features of sarcopenia. Numb is an adaptor protein best known for its critical roles in development including asymmetric ce...
ORGANISM(S): Mus Musculus (ncbitaxon:10090) 
2022-04-28 | MSV000089327 | MassIVE
MetabolomicsPREDICT: untargeted metabolomic profiling in a Brassica napus (canola) breeding population by GC-MS

Genome-wide association studies (GWAS) identified thousands of genetic loci associated with complex plant traits, including many traits of agronomical importance. However, functional interpretation of GWAS results remains challenging because of large candidate regions due to linkage disequilibriu...

2023-11-20 | MTBLS8056 | MetaboLights
MetabolomicsNext-generation biomonitoring of the early-life chemical exposome in neonatal and infant development

Exposure to synthetic and natural chemicals is a major environmental risk factor in the etiology of many chronic diseases. Investigating complex co-exposures is necessary for a holistic assessment in exposome-wide association studies. In this work, a sensitive liquid chromatography-tandem mass sp...

2023-10-26 | MTBLS2442 | MetaboLights
UnknownEffects of Cholecalciferol vs Calcifediol on Total and Free 25-Hydroxyvitamin D and Parathyroid Hormone.
Not available
S-EPMC5460735 | biostudies-literature
UnknownBest practices for constructing, preparing, and evaluating protein-ligand binding affinity benchmarks [Article v0.1].
Not available
S-EPMC9662604 | biostudies-literature
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