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ProteomicsE.coli - Whole organism, DIA, SWATHMS (Midhaetal,scidata2020)
abundance based on DIA, SWATHMS, Interaction consistency score: 8.2, Coverage: 49
ORGANISM(S): 511145 
2020-00-00 | 171934967 | PAXDB
ProteomicsImproving peptide fragment ion detection using travelling wave ion mobility spectrometry with signal enhancement MSE (seMSE)
Recently, a solution to inherent poor ion beam sampling of time-of-flight (TOF) mass analyzers was proposed by restricting detection to ions expected at specific arrival times after being separated in a travelling wave ion mobility spectrometry (TWIMS) cell. Here, we show that this approach can be a...
ORGANISM(S): Oryctolagus Cuniculus Escherichia Coli Bos Taurus Saccharomyces Cerevisiae 
2022-08-01 | PXD030431 | panorama
UnknownCurrent Opinions on Optimal Management of Basilar Artery Occlusion: After the BEST of BASICS Survey.
Not available
S-EPMC12778823 | biostudies-literature
TranscriptomicsRNA-sequencing of human umbilical cord-derived MSC (UCX) in normoxia and hypoxia
Human umbilical cord matrix-derived mesenchymal stromal cells (UCM-MSC) are advantageous since can be easily obtained and display special interest as universal and feasible add-on therapy for myocardial infarction (MI). In this study, UCM-MSC from two umbilical cords, UC-A and UC-B, were transplante...
ORGANISM(S): Homo sapiens 
2021-01-07 | E-MTAB-9978 | biostudies-arrayexpress
ProteomicsAvant-garde: An automated data-driven DIA data curation tool
Vaca S, Peckner R, Shulman N, Krug K, DeRuff KC, Officer A, MacCoss MJ, Carr SA, Jaffe JD, Nature Methods 2020. Multiple challenges remain in Data-Independent Acquisition (DIA) data analysis, like confidently identifying peptides, defining integration boundaries, removing interferences, and controll...
ORGANISM(S): Escherichia Coli (ncbitaxon:562) Homo Sapiens (ncbitaxon:9606) Saccharomyces Cerevisiae (ncbitaxon:4932) 
2020-06-03 | MSV000085540 | MassIVE
UnknownWater as a Reactant: DABCO-Catalyzed Hydration of Activated Alkynes for the Synthesis of Divinyl Ethers.
Not available
S-EPMC11494655 | biostudies-literature
UnknownPerformance analysis of social media platforms: evidence of digital marketing
Not available
S-EPMC9936493 | biostudies-literature
GenomicsGenome-wide ChIP sequencing of NUCKS
NUCKS has a DNA binding domain at C-terminal region. We found that NUCKS has important roles in regulating glucose homeostasis. To get an unbiased handle on the plausible mechanism(s) of NUCKS action, we performed a genome-wide Chromatin Immunoprecipitation (ChIP)-sequencing for NUCKS in primary hep...
ORGANISM(S): Mus musculus 
2014-06-12 | E-GEOD-58100 | biostudies-arrayexpress
GenomicsPervasive genomic transcription during oxidative stress generates thousands of previously uncharacterized lncRNAs (ChIP-Seq)
Oxidative stress (OS) is caused by an imbalance between pro-oxidant and antioxidant reactions which leads to accumulation of reactive oxygen species (ROS) within cells. ROS can be harmful, due to their damaging effects on several cellular components, but are at the same time essential components of ...
ORGANISM(S): Homo sapiens 
2015-05-27 | E-GEOD-55171 | biostudies-arrayexpress
TranscriptomicsSingle-nucleus RNA-seq (10x Genomics Flex) of wild-type C57BL/6J mouse spleen following Plasmodium berghei ANKA infection, generated as a transcriptome-wide reference for the SpatialBench spatial transcriptomics benchmark
This dataset provides single-nucleus RNA-sequencing (snRNA-seq) profiles of wild-type mouse spleen, generated as a matched, transcriptome-wide reference for the SpatialBench resource benchmarking high-resolution spatial transcriptomics platforms (Visium HD, Xenium and MERSCOPE). Spleens were collect...
ORGANISM(S): Mus musculus 
2026-07-07 | E-MTAB-17245 | biostudies-arrayexpress
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