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TranscriptomicsTranscriptome of E.faecium E1162 under bile salts activation
This experiment is to investigate E.faecium E1162 transcriptome profiles under bile salts activation.
ORGANISM(S): Enterococcus faecium 
2013-10-10 | E-MEXP-3796 | biostudies-arrayexpress
TranscriptomicsM-TraM E.faecium BHI and BHI with bile salts
A genome-wide identification of the genetic loci required for bile salts resistance in E. faecium
ORGANISM(S): Enterococcus faecium 
2013-10-10 | E-MEXP-3797 | biostudies-arrayexpress
TranscriptomicsBile Salts Influence Virulence Properties of E. coli O157:H7
Enterohemorrhagic Escherichia coli (EHEC), including serotype O157:H7, cause severe food-borne illness. On route to the human colon, they encounter and resist, numerous anti-microbial ingestion stresses. We hypothesize that these stresses cue EHEC to alter virulence properties. This study investigat...
ORGANISM(S): Escherichia coli 
2011-09-05 | E-GEOD-22060 | biostudies-arrayexpress
TranscriptomicsTranscription profiling time series of Bacillus cereus from cultures grown in media with bile salts
RNA was isolated from control and bile salt cultures 15, 30, and 60 minutes after shift (named C15,C30,C60 and BC15,BS30,BS60, repectively) and hybridized against the reference RNA (C0) isolated immediatly after the shift.
ORGANISM(S): Bacillus cereus 
2007-05-17 | E-MEXP-896 | biostudies-arrayexpress
MetabolomicsMechanisms of action of bile acids in pediatric gastroesophageal reflux: Exploration through non-targeted and targeted metabolomics methods

Purpose: To investigate the pathogenesis of pediatric bile reflux gastritis (BRG) using non-targeted and targeted metabolomics analyses of the changes and content differences of bile acids (BAs) in gastric juice. Methods: Data from 25 pediatric BRG patients treated at Jinhua Maternal and Child He...

2025-12-04 | MTBLS13450 | MetaboLights
MetabolomicsTargeted bile acid profiling of Faecalibaculum rodentium-induced bile acid remodeling in antibiotic-treated mice
This study investigated whether Faecalibaculum rodentium remodels the intestinal bile acid pool through bacterial bile salt hydrolase activity in antibiotic-treated male C57BL/6J mice. Mice were assigned to three groups: control, Faecalibaculum rodentium gavage, and Faecalibaculum rodentium gavage c...
2026-08-07 | MTBLS15285 | MetaboLights
TranscriptomicsKolsto-B. cereus Transcriptional response of the B. cereus ATCC14579 wild type to bile salts stress
Comparison of the transcriptional response of B. cereus ATCC14579 before and after 15 min bile salts stress.
ORGANISM(S): Bacillus cereus 
2012-01-31 | E-MEXP-3535 | biostudies-arrayexpress
Genomics14028s CRISPRi Bile salts
Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S CRISPRi library, growth with and without bile salts.
ORGANISM(S): Salmonella enterica subsp. enterica 
2026-04-15 | E-MTAB-16844 | biostudies-arrayexpress
MetabolomicsBile acid is a significant host factor shaping the gut microbiome of diet induced obese mice (targeted bile acid analysis assay)

BACKGROUND: Intestinal bacteria are known to regulate the bile acid (BA) homeostasis via intestinal biotransformation of BAs and stimulating the expression of fibroblast growth factor 19 through intestinal nuclear farnesoid X receptor (FXR). On the other hand, BAs directly regula...

2017-11-23 | MTBLS547 | MetaboLights
MetabolomicsMechanisms of action of bile acids in pediatric gastroesophageal reflux: Exploration through non-targeted and targeted metabolomics methods

Purpose: To investigate the pathogenesis of pediatric bile reflux gastritis (BRG) using non-targeted and targeted metabolomics analyses of the changes and content differences of bile acids (BAs) in gastric juice. Methods: Data from 25 pediatric BRG patients treat...

2025-12-05 | MTBLS13459 | MetaboLights
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