Biological pretreatment

Show results for

Unknown (1145)
Transcriptomics (181)
Genomics (123)
Metabolomics (90)
Proteomics (58)
Other (3)
Methylation profiling (1)

Organisms

Homo sapiens (116)
Mus musculus (30)
Arabidopsis thaliana (11)
Rattus norvegicus (8)
Saccharomyces cerevisiae (5)
Mycobacterium tuberculosis CDC1551 (2)
Macaca fascicularis (2)
Hordeum vulgare (2)
Oryza sativa Japonica Group (2)
Drosophila melanogaster (2)
Escherichia coli (2)
Coccinella septempunctata (1)
Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821 (1)
Trichoderma atroviride (1)
Populus x canadensis (1)
Zymomonas mobilis (1)
Gossypium hirsutum (1)
Brassica nigra (1)
Brassica napus (1)
Chlorocebus sabaeus (1)
Zea mays (1)
Aedes aegypti (1)
Streptococcus pneumoniae (1)
Salmo salar (1)
Burkholderia cenocepacia (1)
Candida albicans (1)
fermentation metagenome (1)
mouse metagenome (1)
Trametes versicolor (1)
Ovis aries (1)

Organisms

Homo sapiens (28)
Mus musculus (8)
anaerobic digester metagenome (4)
Arabidopsis thaliana (4)
Stenotrophomonas pavanii (3)
Rattus norvegicus (3)
Saccharomyces cerevisiae (3)
Xanthomonas oryzae pv. oryzae KACC 10331 (2)
Macaca fascicularis (2)
sludge metagenome (2)
Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821 (1)
Zymomonas mobilis (1)
Gluconobacter oxydans (1)
lignocellulose-degrading enrichment culture (1)
Trametes versicolor (1)
Chlamydomonas reinhardtii (1)
Aspergillus oryzae (1)
Drosophila melanogaster (1)
Aedes aegypti (1)
Salmo salar (1)
Ovis aries (1)
Solanum lycopersicum (1)
Zea mays (1)
Oryza sativa Japonica Group (1)
bioreactor metagenome (1)

Repository

biostudies-arrayexpress (166)
ENA (111)
MetaboLights (88)
pride (47)
geo (30)
iProX (4)
MassIVE (4)
EGA (3)
GNPS (2)
jPOST (1)

Tissue

Cell culture (8)
Whole body (4)
Epithelial cell (2)
Macrophage (2)
Blood (1)
Blood plasma (1)
Blood serum (1)
Embryonic fibroblast (1)
Embryonic stem cell (1)
Endothelial cell (1)
Endothelial cell of umbilical vein (1)
Feces (1)
Fibroblast (1)
Liver (1)
Plant cell (1)
Pollen (1)
Rosette (1)

Disease

Disease free (2)
Yersinia enterocolitica WAP infected (virulent) (1)
Chronic granulomatous disease (1)
Follicular lymphoma (1)
IRAK-4 Q293X mutation (1)
Locally advanced rectal cancer (1)
Cancer (1)
S enteritidis (1)
Acute myeloid leukemia (1)
Glioblastoma (1)
Non-small cell lung carcinoma (1)

Technology Type

Mass spectrometry (56)
Mass Spectrometry (47)
Mass spectrometry assay (31)
Shotgun proteomics (29)
Affinity purification coupled with mass spectrometry proteomics (9)
Bottom-up proteomics (8)
Data-dependent acquisition (5)
Gel-based experiment (5)
Data-independent acquisition (2)
Illumina HiSeq 2000 (1)
NMR spectroscopy (1)
Chemical cross-linking coupled with mass spectrometry proteomics (1)
Top-down proteomics (1)

Instrument Platform

Liquid Chromatography MS - positive - reverse phase (44)
Liquid Chromatography MS - negative - reverse phase (43)
Liquid Chromatography MS - positive - reverse-phase (17)
Liquid Chromatography MS - negative - reverse-phase (17)
Liquid Chromatography MS - negative - HILIC (5)
Liquid Chromatography MS - positive - HILIC (5)
Liquid Chromatography MS - alternating - reverse-phase (4)
Liquid Chromatography MS - positive - hilic (4)
Leco Pegasus III (3)
Liquid Chromatography MS - negative - hilic (3)
Scanning hardware (2)
BGISEQ-500 (2)
NextSeq 500 (2)
ACQUITY UPLC I-Class (2)
Orbitrap Fusion Lumos (2)
Q Exactive (2)
Gas Chromatography MS - positive (2)
5975C Series GC/MSD (Agilent) (2)
Liquid Chromatography MS - negative (2)
Liquid Chromatography MS - alternating - hilic (2)
Liquid Chromatography MS - alternating - reverse phase (2)
Other (1)
Illumina NovaSeq 6000 (1)
Illumina HiSeq 2000 (1)
Gas Chromatograph HP 6890 Series equipped with an Agilent Mass Selective Detector 5973 (1)
LTQ Orbitrap XL (1)
Liquid Chromatography MS - positive - normal-phase (1)
Liquid Chromatography MS - negative - normal-phase (1)
Direct infusion MS - (1)
Gas Chromatography MS - (1)

Publication Date

2025 (58)
2010 (35)
2026 (33)
2012 (25)
2024 (20)
2014 (20)
2011 (17)
2016 (16)
2023 (16)
2008 (13)
2019 (12)
2009 (12)
2015 (11)
2017 (10)
2013 (10)
2022 (7)
2018 (6)
2006 (6)
2021 (4)
2020 (3)
2007 (3)
2005 (3)
2002 (1)

CHEBI ID

CHEBI:15741 (14)
CHEBI:30769 (14)
CHEBI:15428 (12)
CHEBI:18012 (12)
CHEBI:30915 (12)
CHEBI:33508 (11)
CHEBI:18257 (11)
CHEBI:17053 (11)
CHEBI:17895 (11)
CHEBI:17992 (10)
CHEBI:16958 (10)
CHEBI:17115 (10)
CHEBI:17568 (10)
CHEBI:18050 (10)
CHEBI:16015 (10)
CHEBI:16708 (9)
CHEBI:6650 (9)
CHEBI:28044 (9)
CHEBI:17203 (9)
CHEBI:15971 (9)
CHEBI:16704 (9)
CHEBI:16737 (9)
CHEBI:16199 (9)
CHEBI:16919 (9)
CHEBI:17596 (9)
CHEBI:17775 (9)
CHEBI:26078 (9)
CHEBI:15756 (9)
CHEBI:16828 (9)
CHEBI:17822 (8)

Metabolite Name

Adenine (25)
L-Proline (23)
L-Tyrosine (23)
L-Histidine (22)
Citrulline (21)
Cytosine (21)
Uridine (21)
Creatine (21)
Inosine (21)
Uracil (20)
L-Threonine (20)
L-Phenylalanine (20)
Adenosine (19)
Guanine (18)
L-Tryptophan (18)
L-Glutamine (18)
L-Serine (18)
Taurine (17)
Xanthosine (17)
Sphinganine (17)
Guanosine (17)
Hypoxanthine (17)
Indole (16)
L-Valine (16)
Styrene (15)
Oxypurinol (15)
Oleamide (15)
L-Isoleucine (15)
L-Methionine (15)
2-Hydroxycinnamic acid (14)

First Public Date

2014 (22)
2025 (19)
2026 (16)
2024 (12)
2023 (9)
2022 (6)
2019 (6)
2016 (6)
2017 (5)
2020 (4)
2021 (3)
2018 (2)
2015 (1)

Classification

fungi (1)

Study type

Transcription profiling by array (136)
RNA-seq of coding RNA (8)
Transcription profiling by tiling array (4)
Comparative genomic hybridization by array (3)
ChIP-seq (3)
Other (2)
Proteomic profiling by array (2)
RNA-seq of non coding RNA (2)
Transcription profiling by SAGE (1)
Unknown experiment type (1)
Cell line - High-throughput sequencing (1)
Methylation profiling by array (1)
Methylation profiling by high throughput sequencing (1)
RNA-seq of total RNA (1)

Release Date

2022 (121)
2023 (117)
2021 (110)
2020 (106)
2025 (104)
2024 (94)
2019 (78)
2018 (73)
2016 (70)
2017 (69)
2010 (53)
2014 (50)
2012 (48)
2015 (43)
2011 (37)
2013 (36)
2008 (28)
2009 (27)
2026 (14)
2007 (10)
2006 (8)
2005 (7)
1998 (3)
2002 (2)
2004 (2)
2003 (1)

Lab affiliation

Professor of Molecular Physiology, Leiden Institute of Chemistry, Leiden University, The Netherlands (10)
Analytics Core Facility Essen (ACE), Chemische Biologie, Universität Duisburg-Essen, ZMB, Germany (2)
Georg-August University, Institute of Microbiology and Genetics, Department of Genetics of Eukaryotic Microorganisms (2)
State Key Laboratory of Genetic Engineering, Department of Biochemistry, School of Life Sciences, Fudan University, Shanghai 200438, China (2)
Chemical and Biological Engineering, The Hong Kong University of Science and Technology (HKUST), Hong Kong (1)
Department of Biomedicine, University of Bergen, Norway (1)
Department of Ecogenomics and Systems Biology, University of Vienna, Austria (1)
Department of Life Science and Technology, Graduate School of Life Science and Technology Institute of Science Tokyo (1)
Department of Plant Pathology and Microbiology, Robert H. Smith Faculty of Agriculture, Food and Environment, The Hebrew University of Jerusalem, Rehovot, 76100, Israel (1)
Department of Radiation Medicine Knight Cancer Institute and OHSU 2720 S Moody Avenue Portland, Oregon 97201, USA (1)
Department of Respiratory Medicine, Xiangya Hospital, Central South University (1)
Genetik eukaryotischer Mikroorganismen, Institut für Mikrobiologie und Genetik, Göttingen, Germany (1)
Georg-August-University Göttingen Department of Molecular Microbiology and Genetics Institute of Microbiology and Genetics (1)
Georg-August-University Göttingen, Department of Molecular Microbiology and Genetics, Institute of Microbiology and Genetics (1)
INBIOTEC (1)
Institute for Cellular and Molecular Botany, University of Bonn, Kirschallee 1, 53115 Bonn, Germany (1)
Institute of Animal Husbandry and Veterinary Sciences, Zhejiang Academy of Agricultural Sciences (1)
Instituto de Bioquímica Vegetal y Fotosíntesis, Consejo Superior de Investigaciones Científicas and Universidad de Sevilla, Avenida Américo Vespucio, 49, 41092 Sevilla, Spain (1)
Lawrence Berkeley National Laboratory (1)
MDC Berlin-Buch (1)
National Health Research Institutes, Institute of Molecular and Genomic Medicine (1)
Novo Nordisk Foundation Center for Protein Research, Faculty of Health & Medical Sciences, University of Copenhagen, Blegdamsvej 3B, DK-2200 Copenhagen, Denmark (1)
Ocean University of China (1)
Philip and Aya Leder Professor of Genetics • HMS^Genetics-Quad (1)
Plasma Proteins, Sanquin Research and Landsteiner Laboratory, Academic Medical Center, University of Amsterdam, Amsterdam, The Netherlands (1)
Porto Conte Ricerche, Alghero, Sardinia, Italy (1)
Protein Analytics Lab, Department of Cellular Biochemistry, University Medical Center Göttingen, Germany (1)
Proteomics group, Ri.MED Foundation, Palermo, Italy (1)
Section for Pharmacology and Pharmaceutical Biosciences, Department of Pharmacy, University of Oslo, Norway (1)
Shanghai Jiao Tong University (1)

Previous page
1 / 161
You're on page 1
page 2
page 3
page 4
page 5
page ...
page 161
Next page

Sort by:

Relevance

Page size

Metagenomic analysis of anaerobic digesters upon fungal pretreatment

Biological pretreatment with Trametes versicolor to enhance methane production from lignocellulosic biomass: a metagenomic approach

PRJEB27282 | ENA

Biological pretreatment and anaerobic codigestion of biomass

PRJNA1501357 | ENA

The first application of biological pretreatment in Chinese spirits, utilizing cellulose-degrading probiotics from Jiangshui to improve the quality of Highland Barely Liquor

PRJNA1229515 | ENA

The first application of biological pretreatment in Chinese spirits, utilizing cellulose-degrading probiotics from Jiangshui to improve the quality of Highland Barely Liquor

Highland barley liquor is a distilled spirit made from highland barley on the Tibetan Plateau, but its alcohol yield is limited by the high fiber content of the raw material. In the field of biomass resources, functional microorganisms are commonly used in pretreatment to degrade cellulose and other...

ORGANISM(S): mouse metagenome fermentation metagenome

2025-03-04 | GSE290678 | GEO

Xanthomonas oryzae pv. oryzae KACC 10331

biological pretreatment for brown algae with study of microbial consortiums

PRJDB2828 | ENA

Benzodiazepines in complex biological matrices: Recent updates on pretreatment and detection methods.

Not available

S-EPMC10257149 | biostudies-literature

Xanthomonas oryzae pv. oryzae KACC 10331

biological pretreatment for brown algae with study of microbial consortiums (2)

PRJDB2247 | ENA

Evaluation of Screened Lignin-degrading Fungi for the Biological Pretreatment of Corn Stover.

Not available

S-EPMC5876370 | biostudies-literature

Trancription profiling of breast tumor biopsies to identify markers of Taxane Sensitivity in Breast Cancer

The purpose of this study was to identify molecular markers of pathologic response to neoadjuvant paclitaxel/radiation treatment, protein and gene expression profiling were done on pretreatment biopsies. Patients with high-risk, operable breast cancer were treated with three cycles of paclitaxel fo...

ORGANISM(S): Homo sapiens

2010-06-23 | E-GEOD-22513 | biostudies-arrayexpress

Impact of Ultrasound Pretreatment and Enzyme Concentration on Taste and Biological Activities of Porcine Lung Hydrolyzates.

Not available

S-EPMC12469255 | biostudies-literature

Previous page
1 / 161
You're on page 1
page 2
page 3
page 4
page 5
page ...
page 161
Next page

Sort by:

Relevance

Page size

1601 Results

Show results for

Organisms

Organisms

Repository

Tissue

Disease

Technology Type

Instrument Platform

Publication Date

CHEBI ID

Metabolite Name

First Public Date

Classification

Study type

Release Date

Lab affiliation

Tags

OmicsDI is part of the ELIXIR infrastructure

Tweets