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MetabolomicsOverexpression of vesicle-associated membrane protein PttVAP27-17 as a tool to improve biomass production and the overall saccharification yields in Populus trees

Background

Bioconversion of wood into bioproducts and biofuels is hindered by the recalcitrance of woody raw material to bioprocesses such as enzymatic saccharification. Targeted modification of the chemical composition of the feedstock can improve saccharification but this gain is often abr...
2021-10-06 | MTBLS628 | MetaboLights
MetabolomicsA bovine plasma-derived serum substitute enables continuous manufacturing of cultivated fish biomass
Cultivated fish meat offers a sustainable solution to marine stock depletion, yet industrial scalability is limited by the prohibitive cost of fetal bovine serum (FBS). We developed a cost-effective bovine plasma-derived serum substitute (bPCPE-LTUS) through low-temperature ultrasonication. This phy...
2026-09-25 | MTBLS14288 | MetaboLights
MetabolomicsMetabolomics reveals an involvement of pantothenate for male production responding to the short-day stimulus in the water flea, Daphnia pulex
Under favorable conditions, the micro-crustacean Daphnia pulex produces female offspring by parthenogenesis, whereas in response to various unfavorable external cues, they produce male offspring to induce sexual reproduction (environmental sex determination: ESD). We recently established a suitable ...
2017-04-03 | MTBLS259 | MetaboLights
GenomicsHydrogen production from biomass from banana waste
Hydrogen production from biomass from banana waste
PRJEB33574 | ENA
TranscriptomicsGrowth-rate dependency of de novo resveratrol production in chemostat cultures of an engineered Saccharomyces cerevisiae strain
Saccharomyces cerevisiae has become a popular host for production of non-native compounds. The metabolic pathways involved generally require a net input of energy. To maximize the ATP yield on sugar in S. cerevisiae, industrial cultivation is typically performed in aerobic, sugar-limited fed-batch r...
ORGANISM(S): Saccharomyces cerevisiae 
2015-12-22 | E-GEOD-65942 | biostudies-arrayexpress
GenomicsBiomass from continuous-flow reactor for PHA production
Recirculation factor is a key parameter in continuous-flow biomass selection for PHA production
PRJNA839563 | ENA
GenomicsDeciphering the biological processes underlying tomato biomass production and composition.
Deciphering the biological processes underlying tomato biomass production and composition.
PRJNA527463 | ENA
TranscriptomicsDeciphering the biological processes underlying tomato biomass production and composition.
After tomato fruits harvesting huge amounts of biomass residues, including plant and immature fruit, remaining in the field can be utilized to produce bioenergy. Little is known about the molecular aspects underlying tomato plant biomass production and hydrolysis. To identify genes involved in the r...
ORGANISM(S): Solanum lycopersicum Solanum lycopersicum x Solanum pennellii 
2019-03-17 | GSE128409 | GEO
TranscriptomicsA transcriptomic analysis of Neurospora crassa using five major crop residues and the novel role of the sporulation regulator rca-1 in lignocellulase production
Comparative transcriptional profiling of N. crassa grown on five major crop straws of China (barley, corn, rice, soybean and wheat straws) revealed a highly overlapping group of 430 genes, the Biomass commonly Induced Core Set (BICS). A large proportion of induced carbohydrate-active-enzyme (CAZy) g...
ORGANISM(S): Neurospora crassa OR74A 
2015-01-21 | E-GEOD-60986 | biostudies-arrayexpress
ProteomicsComparative proteomics of plant biomass degradation by the ascomycete fungus Podospora anserine
The project compares the production of plant biomass degrading enzymes by Podospora anserina during growth on different feed stocks.
ORGANISM(S): Podospora anserina 
2017-02-13 | PXD005170 | Pride
Induction Cellulase Pectinase Plant biomass degradation Xylanase Fungal enzymes 
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