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TranscriptomicsGlobal transcriptome response of recombinant protein xylanase producing E. coli in high cell density fed batch culture
Strong production of recombinant proteins interfere with cellular processes in many ways. The extent of the bacterial stress response is determined by the specific properties of the recombinant protein, and by the rates of transcription and translation. The consideration of bacterial stress and star...
ORGANISM(S): Escherichia coli 
2011-05-23 | E-GEOD-29439 | biostudies-arrayexpress
TranscriptomicsComparative genomic, transcriptomic and secretomic profilings of Penicillium oxalicum HP7-1 and its cellulase and xylanase hyper-producing mutant EU2106, and identification of two novel regulators for cellulase and xylanase gene expression
In this study,comparative genomic, transcriptomic and secretomic profilings of Penicillium oxalicum HP7-1 and its cellulase and xylanase hyper-producing mutant EU2106 were employed to screen for novel regulators for cellulase and xylanase gene expression.
ORGANISM(S): Penicillium oxalicum 
2016-08-31 | GSE80076 | GEO
TranscriptomicsThe transcription factor MtHAC-1 plays a dual role in regulating the production of cellulase and xylanase in Myceliophthora thermophila
Background: Filamentous fungi produce large quantities of extracellular enzymes, such as cellulase and xylanase, to degrade polysaccharides derived from plant biomass. This process is controlled by a complex network of transcription factors (TFs). However, the regulatory mechanisms of cellulase and ...
ORGANISM(S): Thermothelomyces thermophilus ATCC 42464 
2025-08-06 | GSE290641 | GEO
TranscriptomicsInactivation of the conserved protease LonA increases production of xylanase and amylase in Bacillus subtilis
In a previous study we used RNA-seq to identify cellular stresses related to the overexpression of xylanase XynA, and found that upregulation of the CtsR regulon improves the yield of XynA production in B. subtilis. In this study, we compared the transcriptomes of B. subtilis cells overexpressing ei...
ORGANISM(S): Bacillus subtilis 
2024-08-30 | GSE270692 | GEO
GenomicsEffects of transcription factor POX04513 on the transcription of cellulase genes and xylanase genes in Penicillium oxalicum
Effects of transcription factor POX04513 on the transcription of cellulase genes and xylanase genes in Penicillium oxalicum
PRJNA647602 | ENA
TranscriptomicsIdentification of a novel forkhead transcription factor MtFKH1 for cellulase and xylanase gene expression in Myceliophthora thermophila (ATCC 42464)
Myceliophthora thermophila, a thermophilic fungus, has been utilized to produce industrially important enzymes in biorefineries. In filamentous fungi, the mechanisms underlying cellulase and xylanase expression have been explored, which uncovered the complex networks controlled by numerous transcrip...
ORGANISM(S): Thermothelomyces thermophilus ATCC 42464 
2025-04-14 | GSE274798 | GEO
TranscriptomicsIdentification of a novel forkhead transcription factor MtFKH1 for cellulase and xylanase gene expression in Myceliophthora thermophila ATCC 42464
Myceliophthora thermophila, a thermophilic fungus, has been utilized to produce industrially important enzymes in biorefineries. In filamentous fungi, the mechanisms underlying cellulase and xylanase expression have been explored, which uncovered the complex networks controlled by numerous transcrip...
ORGANISM(S): Thermothelomyces thermophilus ATCC 42464 
2025-04-14 | GSE274481 | GEO
GenomicsLarge-scale transcriptomic analyses reveal a global co-expression network of cellulase and xylanase genes in filamentous fungi
Large-scale transcriptomic analyses reveal a global co-expression network of cellulase and xylanase genes in filamentous fungi
PRJNA550530 | ENA
TranscriptomicsEffects of transcription factor POX04513 on the transcription of cellulase genes and xylanase genes in Penicillium oxalicum
To investigate the effect of the transcription factor POX04513 in Penicillium oxalicum on the expression levels of cellulase and xylanase genes in solid and liquid fermentation
ORGANISM(S): Penicillium oxalicum 
2023-05-06 | GSE154882 | GEO
TranscriptomicsLarge-scale transcriptomic analyses reveal a global co-expression network of cellulase and xylanase genes in filamentous fungi
A global co-expression network of cellulase and xylanase genes was identified in P. oxalicum, their transcriptional levels depended on the induction of carbon sources and induction time.
ORGANISM(S): Penicillium oxalicum 
2020-04-27 | GSE133258 | GEO
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