Biswas S S - OmicsDI

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Unknown (2085)
Proteomics (52)
Transcriptomics (15)
Genomics (4)
Metabolomics (3)
Other (1)

Organisms

Homo sapiens (53)
Mus musculus (10)
Rattus norvegicus (2)
Pseudomonas syringae (1)
Lolium perenne (1)
Schizosaccharomyces pombe (1)
Severe acute respiratory syndrome coronavirus 2 (1)
Bombyx mori (1)

Repository

pride (41)
biostudies-arrayexpress (19)
PanoramaPublic (6)
PeptideAtlas (4)
MetaboLights (3)
GPMDB (1)
MassIVE (1)

Tissue

Brain (6)
Cell culture (5)
Platelet (4)
Epithelial cell (4)
Lung (4)
Blood plasma (3)
Lymph node (3)
Fibroblast (2)
Nasal lavage fluid (2)
Permanent cell line cell (2)
B cell (1)
Blood cell (1)
Cell suspension culture (1)
Colon epithelial cell (1)
Dendritic cell (1)
Embryo (1)
Embryonic stem cell (1)
Epithelium of esophagus (1)
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MDA-MB-231 cell (1)
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Pituitary gland (1)
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Urine (1)

Disease

Brain cancer (4)
COVID-19 (2)
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Malignant neoplasm of ovary (2)
Non-small cell lung carcinoma (2)
Not Available (1)
Chronic myeloid leukemia (1)
Colon cancer (1)
Disease free (1)
Glioblastoma (1)
Head and neck squamous cell carcinoma (1)
Parkinson's disease (1)
Plasmacytoma (1)
Prostate adenocarcinoma (1)
Rheumatoid arthritis (1)
Tuberculosis (1)
Wounds and Injuries (1)

Technology Type

Mass Spectrometry (41)
Shotgun proteomics (25)
Affinity purification coupled with mass spectrometry proteomics (5)
Bottom-up proteomics (5)
Mass spectrometry (3)
SWATH MS (3)
Top-down proteomics (3)
SRM/MRM (2)
Chemical cross-linking coupled with mass spectrometry proteomics (1)
Gel-based experiment (1)
Mass spectrometry imaging (1)

Instrument Platform

LTQ Orbitrap (4)
Illumina HiSeq 2500 (2)
Liquid Chromatography MS - positive - reverse phase (2)
NextSeq 550 (1)
Illumina NovaSeq 6000 (1)
Instrument (1)
Orbitrap Eclipse (1)
6540 Q-TOF LC/MS (Agilent) (1)
LTQ Orbitrap Velos (Thermo Scientific) (1)

Publication Date

2014 (10)
2022 (9)
2025 (9)
2021 (8)
2023 (5)
2026 (5)
2020 (4)
2018 (3)
2010 (3)
2019 (3)
2015 (2)
2012 (2)
2024 (2)
2009 (1)
2006 (1)
2016 (1)
2017 (1)
2013 (1)

UNIPROT ID/AC

A0A0A0MSA7 (4)
A5A3E0 (4)
A6NHL2 (4)
B3KML9 (4)
B4DPR2 (4)
B4E3A4 (4)
D3DPU2 (4)
E7EX29 (4)
H0Y5C6 (4)
H0Y5F3 (4)
H0YDB2 (4)
I3L3D5 (4)
I3L4N8 (4)
K7EKD8 (4)
K7EQ37 (4)
O00264 (4)
O00429 (4)
O00429-4 (4)
O14545 (4)
O14828 (4)
O14950 (4)
O14974 (4)
O14974-4 (4)
O15117 (4)
O15231 (4)
O15231-2 (4)
O15231-5 (4)
O43150 (4)
O43150-2 (4)
O43182 (4)

CHEBI ID

CHEBI:15929 (3)
CHEBI:10106 (2)
CHEBI:10135 (2)
CHEBI:102216 (2)
CHEBI:111173 (2)
CHEBI:116314 (2)
CHEBI:1217 (2)
CHEBI:134485 (2)
CHEBI:134750 (2)
CHEBI:134758 (2)
CHEBI:134827 (2)
CHEBI:134834 (2)
CHEBI:134894 (2)
CHEBI:134934 (2)
CHEBI:135291 (2)
CHEBI:135566 (2)
CHEBI:135932 (2)
CHEBI:137055 (2)
CHEBI:137125 (2)
CHEBI:137268 (2)
CHEBI:1391 (2)
CHEBI:142245 (2)
CHEBI:142683 (2)
CHEBI:143054 (2)
CHEBI:143870 (2)
CHEBI:1458 (2)
CHEBI:156235 (2)
CHEBI:15746 (2)
CHEBI:15756 (2)
CHEBI:1582 (2)

Metabolite Name

(-)-Octanoylcarnitine (2)
(-)-Rhododendrin (2)
(-)-THREO-SPHINGOSINE (2)
(2E)-2-Tridecene-4,6,8-triyn-1-ol (2)
(2E,4E,12Z)-N-Isobutyl-2,4,12-octadecatrienamide (2)
(2R,3R,4S,5S,6R)-2-[(3Z)-hex-3-en-1-yloxy]-6-(hydroxymethyl)oxane-3,4,5-triol (2)
(2R,3S,4S,5R,6R)-2-(hydroxymethyl)-6-(2-phenylethoxy)oxane-3,4,5-triol (2)
(2R,3S,4S,5S,6R)-2-({7-hydroxy-4-[(3Z)-5-hydroxy-3-methylpent-3-en-1-yl]-4a,8,8-trimethyl-3-methylidene-decahydronaphthalen-2-yl}oxy)-6-(hydroxymethyl)oxane-3,4,5-triol (2)
(2S)-2-Amino-8-hydroxyoctanoic acid (2)
(3S)-3-Amino-2-azepanone (2)
(4E)-1,7-Bis(4-hydroxyphenyl)-4-hepten-3-one (2)
(9E,12E)-9,12-Octadecadienoic acid (2)
(9Z)-9-Octadecenamide (2)
(E)-Dacarbazine (2)
(E)-p-coumaric acid (2)
(Z)-3-butylidene-7-hydroxyphthalide (2)
(Z)-Hex-3-enyl benzoate (2)
1,2-Cyclohexadione (2)
1,3,7-Octanetriol (2)
1,4-Anhydro-6-O-dodecanoyl-2,3-bis-O-(2-hydroxyethyl)-D-glucitol (2)
1-(4-methylphenyl)-3,5-diphenylpent-2-ene-1,5-dione (2)
1-Allyl-2,3,4,5-tetramethoxybenzene (2)
1-Heptanethiol (2)
1-Hexadecanoyl-sn-glycero-3-phosphocholine (2)
1-Hexyl-2-methylbenzene (2)
1-Linoleoyl-sn-glycero-3-phosphocholine (2)
1-Monopalmitoylglycerol (2)
1-Oleoyl-rac-glycerol (2)
1-Tetradecylamine (2)
1-[2,6-Dimethyl-4-(2-methyl-2-propanyl)-3,5-dinitrophenyl]ethanone (2)

Study type

Transcription profiling by array (9)
RNA-seq of coding RNA (4)
ChIP-seq (2)
Methylation profiling by high throughput sequencing (2)
Transcription profiling by SAGE (1)
Unknown experiment type (1)

Release Date

2025 (266)
2022 (254)
2024 (241)
2023 (226)
2021 (224)
2020 (180)
2019 (113)
2018 (109)
2017 (95)
2016 (74)
2014 (57)
2015 (56)
2026 (49)
2013 (36)
2012 (33)
2011 (25)
2010 (19)
2009 (16)
2008 (15)
2006 (4)
2007 (4)
2004 (2)
2001 (2)
2005 (1)
2003 (1)
2000 (1)
1999 (1)

Lab affiliation

Proteomics Lab, 304, BSBE Department, Indian Institute Technology Bombay, Powai, Mumbai, India-400076 (4)
Institute of Bioinformatics , International Technology Park, Bangalore, India (2)
1Thoracic and Gastrointestinal Oncology Branch, Center for Cancer Research, National Cancer Institute, Bethesda, MD, USA (1)
Assistant Professor Department of Biochemistry Montreal, Quebec H3G 1Y6 (1)
Associate Professor, Department of Laboratory Medicine, UCSF (1)
Biosciences and Bioengineering, IIT Bombay, India (1)
CSIR-Institute of Genomics and Integrative Biology (1)
Chief Scientist, Professor and Head, Cancer Biology Division CSIR-Central Drug Research Institute & AcSIR, LSS-006 Jankipuram Extension, Lucknow 226031, India (1)
Complex Analysis Group BRIC-Translational Health Science and Technology Institute Dept of Biotechnology, Govt Of India NCR Biotech Science Cluster, 3rd Milestone, Faridabad–Gurugram Expressway, PO box #04, Faridabad- 121001 (Haryana) (1)
Dana Farber Cancer Institute, Boston, MA Harvard Medical School, Boston, MA (1)
Department of Integrated Immunobiology Duke School of Medicine Durham, NC, USA (1)
Department of Integrated Immunobiology Duke School of Medicine Durham, NC, USA (1)
Dept of pathology, Vision research foundation, Chennai, India (1)
El Bachir Affar, PhD, Professor Department of Medicine, University of Montreal Director of the Cell Signaling and Cancer Research Unit Research Center, Maisonneuve-Rosemont Hospital 5415 Assomption Blvd., Montreal, Quebec, H1T 2M4, CANADA Tel: 514 252-3400 (Ext: 3343) (1)
Functional Proteomics, ICR (1)
Human Oncology and Pathogenesis Program, Memorial Sloan Kettering Cancer Center, New York, NY, United States (1)
ICR, Functional Proteomics (1)
IICB-Translational Research Unit of Excellence, CSIR-Indian Institute of Chemical Biology,Kolkata, India (1)
Immunology, Moffitt Cancer Center, Tampa, FL (1)
Institute for Physiological Chemistry Medizinisch-Theoretisches Zentrum MTZ Technical University Dresden Fiedlerstraße 42 D-01307 Dresden (1)
Institute of Bioinformatics 7th floor, Discoverer building, International Tech Park, Bangalore 560 066 (1)
Max Planck Institute for Infection Biology, Berlin, Germany (1)
Mol & Med. Pharmacology (1)
PI BSBE PROTEOMICS LAB IIT BOMBAY (1)
PROFESSOR, PI, PROTEOMICS LAB, DEPARTMENT OF BIOSCIENCES AND BIOENGINEERING, IIT BOMBAY (1)
PROFESSOR, PRINCIPLE INVESTIGATOR, PROTEOMICS LAB, BSBE, IIT BOMBAY (1)
PROFESSOR, PRINCIPLE INVESTIGATOR, PROTEOMICS LAB, DEPARTMENT OF BIOSCIENCES AND BIOENGINEERING, IIT BOMBAY (1)
Prof. Sanjeeva Srivastava, PhD, FRSB, FRSC Professor and Group Head Department of Biosciences & Bioengineering Indian Institute of Technology Bombay Mumbai – 400076, India Phone: +91-22-2576-7779 Email: sanjeeva@iitb.ac.in (1)
Professor (1)
Proteomics Lab, Department of Biosciences and Bioengineering, IIT Bombay, Mumbai-400076, India. (1)

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Expression data from fission yeast Schizosaccharomyces pombe under nitrosative stress

Nitric oxide being a versatile molecule inside biological systems, from being both a cell signaling molecule to a potent stress agent, has significant effect in the transcriptional response in fission yeast. We have used fission yeast microarrays to identify cellular targets of Nitric Oxide (NO) and...

ORGANISM(S): Schizosaccharomyces pombe

2015-01-30 | E-GEOD-50899 | biostudies-arrayexpress

Structural and mechanistic investigations of protein S-glycosyltransferases.

Not available

S-EPMC8688163 | biostudies-literature

Structure-Activity Relationships of the S-Linked Glycocin Sublancin.

Not available

S-EPMC5732038 | biostudies-literature

Poly(Pyridinium Salt)s Containing 2,7-Diamino-9,9'-Dioctylfluorene Moieties with Various Organic Counterions Exhibiting Both Lyotropic Liquid-Crystalline and Light-Emitting Properties.

Not available

S-EPMC7998704 | biostudies-literature

Loss of transcription factor EB dysregulates the G1/S transition and DNA replication in mammary epithelial cells.

Not available

S-EPMC9764199 | biostudies-literature

Global Proteomics Analysis of S-023-0996 Treatment in Human Breast Cancer Cell line MDA-MB-231

To elucidate the mechanism underlying the anticancer activity of S-023-0996, global proteomic analysis was performed in human breast cancer cells. Mass spectrometry-based proteomic profiling was carried out in MDA-MB-231 cells following treatment with four experimental groups: Tazemetostat (Taz), Ge...

ORGANISM(S): Homo sapiens (Human)

2026-09-03 | PXD080173 | Pride