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TranscriptomicsTranscription profiling of E. coli K-12 W3110 strain grown at Ph5.7, 7.0, 8.5 reveals pH and anaerobiosis coregulate metabolism, multidrug transporters, and envelope composition
In Escherichia coli, pH-dependent gene expression varies with oxygen level. Anaerobic pH-dependent expression ratios were analyzed and compared to the published analysis of aerated cultures (Maurer et al, 2005). E. coli K-12 strain W3110 was cultured in closed tubes containing LBK broth buffered a...
ORGANISM(S): Escherichia coli 
2008-06-13 | E-GEOD-4556 | biostudies-arrayexpress
ProteomicsBlue native gel electrophoresis of Syntrophus aciditrophicus proteome
Blue native gel electrophoresis of Syntrophus aciditrophicus proteome
ORGANISM(S): Syntrophus Aciditrophicus Sb 
2019-04-29 | PXD011101 | JPOST Repository
ProteomicsPATIENTS ANTIBODIES RECOGNIZED TWO ISOENZYMES OF GLYCERALDEHYDE -3P- DESHYDROGENASE OF ECHINOCOCCUS GRANULOSUS s. l. Cloning epitopes and enzymatic analysis in silico
Our group is working identifying antigens from E. granulosus s.l by immune-identification and LC-MS/MS methodologies, CE patient sera recognized antigens expressed by cell line from bovine’s protoscolices E .granulouss G1 (EGPE). The antigenic model from EGPE cells showed more sensitivity for patien...
ORGANISM(S): Echinococcus granulosus group 
2025-11-24 | PXD069559 | Pride
Echinococcus granulosus epitopes Glyceraldehyde -3p- deshydrogenase 
UnknownThe Early Impact Of The 'Alternative Quality Contract' On Mental Health Service Use And Spending In Massachusetts.
Not available
S-EPMC4950854 | biostudies-literature
TranscriptomicsTranscription profiling of mouse B10.pl WT mice versus B10.PL RAG-/-
Previous work has led us to examine the differences in the choroid plexus function in B10.pl WT mice versus B10.PL RAG-/- mice. We believe that there is a difference between those that are normal functioning and those that are lymphocyte deficient. To determine the gene expression profile of the cho...
ORGANISM(S): Mus musculus 
2008-06-20 | E-GEOD-11443 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of mouse model of succinate semialdehyde dehydrogenase deficiency vs wild type litter mates reveals multiple myelin alterations
Succinate semialdehyde dehydrogenase (SSADH) deficiency is a rare autosomal recessive disorder effecting approximately 350 people around the world. Patients suffering from SSADH deficiency experience language acquisition failure, memory deficiencies, autism, increased aggressive behaviors, and seizu...
ORGANISM(S): Mus musculus 
2007-07-07 | E-GEOD-2866 | biostudies-arrayexpress
MetabolomicsChitin utilization by marine picocyanobacteria and the evolution of a planktonic lifestyle.
Marine picocyanobacteria Prochlorococcus and Synechococcus, the most abundant photosynthetic cells in the oceans, are generally thought to have a primarily single-celled and free-living lifestyle. However, while studying the ability of picocyanobacteria to supplement photosynthetic car...
2024-02-21 | MTBLS5229 | MetaboLights
GenomicsA novel recurrent mutation in MITF predisposes to familial and sporadic melanoma

We conducted whole-genome sequencing of probands from several melanoma families, identifying one individual carrying a novel germline variant (c.G1075A, NM_000248.3; p.E318K, NP_000239.1; rs149617956) in the melanoma lineage-specific oncogene MITF. While the variant cosegregated with melanoma in ...

phs000419.v1.p1 | EGA
UnknownWhole-genome sequencing of Chlamydia psittaci from Australasian avian hosts: A genomics approach to a pathogen that still ruffles feathers.
Not available
S-EPMC10438822 | biostudies-literature
ProteomicsIntegration of JAK/STAT receptor-ligand trafficking, signalling and gene expression in Drosophila melanogaster cells
The JAK/STAT pathway is an essential signalling cascade required for multiple processes during both development and for adult homeostasis. A key question in understanding this pathway is how it is regulated in different cell contexts. Here we have examined how endocytic processing contributes to sig...
ORGANISM(S): Drosophila melanogaster (Fruit fly) 
2020-09-29 | PXD020719 | Pride
Endocytosis Phosphorylation Drosophila Jak/stat signalling Lc-ms/ms 
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