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TranscriptomicsGene expression analysis of cervical cancer progression
Affymetrix-U133-plus2.0-based gene expression analysis of laser-captured epithelium from 128 cervical tissue specimens from women enrolled in SUCCEED Cervical cancer (CC) is the second most frequent cancer in women and the third leading cause of cancer death in women worldwide. Our analysis of norma...
ORGANISM(S): Homo sapiens 
2015-07-01 | E-GEOD-63514 | biostudies-arrayexpress
ProteomicsThe responses of the pulmonary pathogen Aspergillus fumigatus to the neutrophil derived oxidant N- chlorotaurine
Aspergillus fumigatus is a pulmonary pathogen to individuals who are immunocompromised (e.g. mylosuppression) and those who display defects in immune equilibrium, commonly observed in the Cystic fibrosis lung and presents itself in the form as allergic bronchopulmonary aspergillosis.32 In the latter...
ORGANISM(S): Aspergillus fumigatus var. fumigatus 
2018-12-19 | PXD009853 | Pride
Aspergillus fumigatus nct n-chlorotaurine proteomics infection lung cystic fibrosis abpa 
UnknownCOVID-19: A Boon or a Bane for Creativity?
Not available
S-EPMC7848087 | biostudies-literature
UnknownHydrocarbonoclastic Alcanivorax Isolates Exhibit Different Physiological and Expression Responses to n-dodecane.
Not available
S-EPMC5174103 | biostudies-literature
UnknownRole of N-glycosylation in activation of proMMP-9. A molecular dynamics simulations study.
Not available
S-EPMC5766141 | biostudies-literature
UnknownEffect of Applying Struvite and Organic N as Recovered Fertilizers on the Rhizosphere Dynamics and Cultivation of Lupine (Lupinus angustifolius).
Not available
S-EPMC7717983 | biostudies-literature
ProteomicsIdentification of proteins that interact with the lncRNA Sarrah
Long non-coding RNAs (lncRNAs) contribute to (patho)physiological processes in the heart. Aging is the major risk factor for cardiovascular disease. Apoptosis of individual cardiomyocytes is one of the underlying causes for age-related cardiac dysfunction. Here, we identified the lncRNA Sarrah that ...
ORGANISM(S): Mus musculus (Mouse) 
2020-04-01 | PXD018315 | Pride
Rna/protein interaction 
ProteomicsVE-cadherin associated proteins in the absence of lncRNA LASSIE
The shear stress-regulated lncRNA LASSIE interacts with junctional proteins (e.g. PECAM-1, which interacts with VE-cadherin) and influences endothelial barrier function. Here we characterize the remodeling of the VE-Cadherin complex by the lncRNA LASSIE. LASSIE silenced HUVECs were subjected to co-i...
ORGANISM(S): Homo sapiens (Human) 
2021-09-09 | PXD018725 | Pride
Rna/protein interaction 
ProteomicsIdentification of protein interaction partners of the lncRNA Lassie
The shear stress-regulated lncRNA LASSIE interferes with endothelial cell function as knockdown of Lassie affects apoptosis, proliferation and angiogenic sprouting in vitro. RNA-antisense purification and subsequent mass spectrometry analysis identifed junctional proteins (such as PECAM-1) as intera...
ORGANISM(S): Homo sapiens (Human) 
2021-07-22 | PXD018724 | Pride
Rna/protein interaction 
ProteomicsIdentification of VE-cadherin associated proteins regulated through the lncRNA LASSIE
The shear stress-regulated lncRNA LASSIE interacts with cytoskeletal proteins as shown by RNA-antisense purification and subsequent mass spectrometry analysis using an anti-LASSIE and a non-targeting 3’ Desthiobiotin-TEG labeled 2’ O-Me-RNA. As this analysis resulted in high protein binding to the n...
ORGANISM(S): Homo sapiens (Human) 
2021-09-09 | PXD018734 | Pride
Rna/protein interaction 
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