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OmicsDI

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Unknown (1786)
Transcriptomics (35)
Proteomics (35)
Genomics (11)
Models (3)
Metabolomics (3)

Organisms

Homo sapiens (39)
Mus musculus (14)
Rattus norvegicus (4)
Synechococcus sp. (4)
Sordaria macrospora (3)
Hydra oligactis (1)
Aurelia aurita (1)
Hydra vulgaris (1)
Zea mays (1)
Sus scrofa (1)
Drosophila melanogaster (1)
Dunaliella viridis (1)
Chlamydia trachomatis (1)
Human coronavirus NL63 (1)
Prochlorococcus sp. (1)

Organisms

Homo sapiens (4)
Dunaliella viridis (1)

Repository

biostudies-arrayexpress (35)
pride (30)
EGA (5)
ENA (5)
MassIVE (4)
BioModels (3)
MetaboLights (3)
geo (1)
PanoramaPublic (1)

Tissue

Cell culture (10)
Brain (4)
HeLa cell (2)
Hepatocyte (2)
Peripheral blood mononuclear cell (2)
Astrocyte (1)
B cell (1)
Cell line cell (1)
Embryonic fibroblast (1)
Epithelial cell (1)
HiPSC cell (1)
Kidney (1)
Liver (1)
Macrophage (1)
Motor neuron (1)
Tear (1)
White matter (1)

Disease

Amyotrophic lateral sclerosis (2)
Portal hypertension (1)
Brain cancer (1)
COVID-19 (1)
Cancer (1)
Chronic lymphocytic leukemia (1)
Disease free (1)
Lymphoma (1)
Multiple sclerosis (1)
Niemann-Pick disease type C1 (1)
Secondary progressive multiple sclerosis (1)

Technology Type

Mass Spectrometry (30)
Shotgun proteomics (22)
Affinity purification coupled with mass spectrometry proteomics (6)
Bottom-up proteomics (4)
Data-dependent acquisition (4)
Gel-based experiment (4)
Mass spectrometry (3)
Illumina HiSeq 2000 (1)
SRM/MRM (1)

Instrument Platform

Liquid Chromatography MS - negative - reverse phase (2)
GenePix 4000A [Axon Instruments] (1)
Illumina NovaSeq 6000 (1)
NextSeq 500 (1)
LTQ Orbitrap (1)
Orbitrap Fusion ETD (1)
Orbitrap Fusion Lumos (1)
Q Exactive HF-X (1)
Q Exactive Plus (1)
Liquid Chromatography MS - alternating - reverse phase (1)
Liquid Chromatography MS - negative - hilic (1)
Liquid Chromatography MS - positive - hilic (1)
Liquid Chromatography MS - positive - reverse phase (1)

Publication Date

2021 (16)
2018 (6)
2012 (6)
2008 (6)
2026 (5)
2016 (5)
2013 (5)
2024 (4)
2014 (4)
2019 (4)
2022 (3)
2023 (3)
2011 (2)
2010 (2)
2025 (2)
2015 (1)
2007 (1)
2020 (1)
2017 (1)

CHEBI ID

CHEBI:64446 (2)
CHEBI:132673 (1)
CHEBI:132676 (1)
CHEBI:132957 (1)
CHEBI:134270 (1)
CHEBI:134271 (1)
CHEBI:134428 (1)
CHEBI:134451 (1)
CHEBI:136148 (1)
CHEBI:136149 (1)
CHEBI:136162 (1)
CHEBI:136170 (1)
CHEBI:136171 (1)
CHEBI:136176 (1)
CHEBI:136186 (1)
CHEBI:136203 (1)
CHEBI:136236 (1)
CHEBI:136239 (1)
CHEBI:136243 (1)
CHEBI:136246 (1)
CHEBI:136256 (1)
CHEBI:136259 (1)
CHEBI:136493 (1)
CHEBI:136496 (1)
CHEBI:136498 (1)
CHEBI:136499 (1)
CHEBI:136579 (1)
CHEBI:137597 (1)
CHEBI:137655 (1)
CHEBI:140362 (1)

Metabolite Name

Acetyl-CoA (1)
Alpha-ketoglutarate (1)
Butyrate (1)
Butyryl-CoA (1)
Cer d18:1/16:0 (1)
Citrate (1)
DAG 16:0-16:0 (1)
DAG 16:0-18:0 (1)
DAG 16:0-18:1 (1)
DAG 16:0-18:2 (1)
DAG 16:0-18:3 (1)
DAG 18:0-18:0 (1)
DAG 18:0-18:1 (1)
DAG 18:0-18:2 (1)
DAG 18:1-18:2 (1)
DAG 18:2-18:2 (1)
DAG 18:2-20:2 (1)
DAG 20:0-18:2 (1)
DAG 20:1-18:2 (1)
DAG 35:2 (1)
DAG 36:5 DAG 18:2-18:3 (1)
LPC 16:0 (1)
LPC 18:0 (1)
LPC 18:1 (1)
LPC 18:2 (1)
LPC 20:0 (1)
LPE 16:0 (1)
LPE 18:2 (1)
LPI 16:0 (1)
LPI 18:2 (1)

IsPrivate

False (3)

Submitter Keywords

Machine Learning Model (3)

First Public Date

2024 (4)
2018 (1)

Modelling Approach

Other (1)
Random forest procedure (1)
Support-vector machine (1)

Study type

Transcription profiling by array (27)
Methylation profiling by array (3)
Comparative genomic hybridization by array (2)
Hi-C (1)
DNA-seq (1)
RNA-seq of total RNA (1)

Release Date

2022 (221)
2025 (209)
2021 (207)
2023 (175)
2024 (171)
2020 (133)
2016 (104)
2018 (100)
2019 (94)
2017 (71)
2015 (61)
2014 (55)
2013 (47)
2012 (35)
2011 (30)
2026 (28)
2010 (23)
2008 (18)
2009 (15)
2007 (6)
2006 (4)
2000 (4)
2004 (2)
2003 (2)
2001 (2)
1999 (2)
2002 (1)
1996 (1)

Lab affiliation

University of the Balearic Islands (5)
Univ. Bordeaux, Plateforme Proteome, 33000, Bordeaux, France (2)
1) CNRS - ITAV USR3505, 31106 Toulouse, France 2) Nova Medical School, CEDOC- Chronic Diseases, 1150-082, Lisboa, Portugal (1)
1.Department of Medical Oncology, Inselspital, Bern University Hospital, University of Bern, 3010 Bern, Switzerland. 2.Department for BioMedical Research, University of Bern, 3008 Bern, Switzerland. 3. Conway Institute for Biomolecular and Biomedical Research, University College Dublin, Dublin D04 V1W8, Ireland. (1)
3Biomolecular Mass Spectrometry and Proteomics, Bijvoet Center for Biomolecular Research and Utrecht Institute for Pharmaceutical Sciences, University of Utrecht, Padualaan 8, Utrecht 3584 CH, The Netherlands. 4Netherlands Proteomics Center, Padualaan 8, Utrecht 3584 CH, The Netherlands. (1)
Center for Immunity and Immunotherapies, Seattle Children's Research Institute, Seattle, WA USA (1)
Chromatin Biology Laboratory, Josep Carreras Leukaemia Research Institute (IJC), Ctra de Can Ruti, Camí de les Escoles s/n, 08916, Badalona, Barcelona, Spain (1)
DZNE - German Center for Neurodegenerative Diseases Munich, Neuroproteomics, Feodor-Lynen Str. 17, D-81377 Munich, Germany (1)
Department of Biochemistry, University of Washington, Seattle, Washington, USA (1)
Department of Molecular Physiology, Leiden Institute of Chemistry, Leiden University, Einsteinweg 55, 2333 CC, Leiden, The Netherlands (1)
Department of Physiology & Pharmacology, Karolinska Institutet, Stockholm, Sweden Dr Margarete Fischer-Bosch Institute of Clinical Pharmacology, Stuttgart, Germany University of Tübingen, Tübingen, Germany (1)
Dr. Margarete Fischer-Bosch Institute of Clinical Pharmacology Auerbachstr. 112 70376 Stuttgart Germany (1)
Georg-August University, Institute of Microbiology and Genetics, Department of Genetics of Eukaryotic Microorganisms (1)
Georg-August Universität Göttingen, Institute of Microbiology and Genetics, Department of Genetics of Eukaryotic Microorganisms (1)
Georg-August-Universität Göttingen, Institute of Microbiology and Genetics, Department of Genetics of Eukaryotic Microorganisms (1)
Institute for Biochemistry and Molecular Biology, Medical Faculty, University of Bonn, Germany (1)
Institute for Ophthalmic Research, Core Facility for Medical Bioanalytics, University of Tübingen, Elfriede-Aulhorn-Strasse 7, 72076 Tübingen, Germany (1)
KU Leuven - University of Leuven, Department of Neurosciences, Experimental Neurology and Leuven Research Institute for Neuroscience and Disease (LIND), 3000 Leuven, Belgium VIB, Vesalius Research Center, Laboratory of Neurobiology, 3000 Leuven, Belgium (1)
KU Leuven - University of Leuven, Department of Neurosciences, Experimental Neurology and Leuven Research Institute for Neuroscience and Disease (LIND), B-3000 Leuven, Belgium; VIB, Center for Brain and Disease Research, Laboratory of Neurobiology, Leuven, Belgium; University Hospitals Leuven, Department of Neurology, Leuven, Belgium. (1)
Lymphoma Translational Group, Josep Carreras Leukaemia Research Institute, Badalona, Spain (1)
MIT Department of Biological Engineering David H Koch Institute for Integrative Cancer Research (1)
Proteomics Service CIC bioGUNE Bizkaia Tech. Park Build. 800 erio 48160 Spain (1)
Spanish National Cancer Research Center (CNIO) (1)
Umea University (1)
Univ. Bordeaux, Plateforme Proteome, 33000, Bordeaux, France ( lab head ) (1)