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GenomicsHigh-resolution genome-wide in vivo footprinting of diverse transcription factors in human cells
This SuperSeries is composed of the following subset Series: GSE25344: High-resolution genome-wide in vivo footprinting of diverse transcription factors in human cells (Dnase-seq) GSE25416: High-resolution genome-wide in vivo footprinting of diverse transcription factors in human cells (ChIP-seq) F...
ORGANISM(S): Homo sapiens 
2010-11-18 | E-GEOD-25442 | biostudies-arrayexpress
GenomicsHigh-resolution genome-wide in vivo footprinting of diverse transcription factors in human cells (Dnase-seq)
Using DNaseI hypersensitivity (HS) assays (Dnase-seq), high resolution DNaseI digestion profiles were generated genome-wide in diverse human cell types. We showed that within general regions of DNaseI HS that are known to identify locations of gene regulatory elements, DNaseI digestion patterns all...
ORGANISM(S): Homo sapiens 
2010-11-18 | E-GEOD-25344 | biostudies-arrayexpress
GenomicsHigh-resolution genome-wide in vivo footprinting of diverse transcription factors in human cells (ChIP-seq)
Using DNaseI hypersensitivity (HS) assays (Dnase-seq), high resolution DNaseI digestion profiles were generated genome-wide in diverse human cell types. We showed that within general regions of DNaseI HS that are known to identify locations of gene regulatory elements, DNaseI digestion patterns all...
ORGANISM(S): Homo sapiens 
2010-11-18 | E-GEOD-25416 | biostudies-arrayexpress
UnknownSingle-cell profiling reveals the importance of CXCL13/CXCR5 axis biology in lymphocyte-rich classic Hodgkin lymphoma.
Not available
S-EPMC8521678 | biostudies-literature
UnknownSAMQA: error classification and validation of high-throughput sequenced read data.
Not available
S-EPMC3170309 | biostudies-literature
UnknownHighly conserved, non-human-like, and cross-reactive SARS-CoV-2 T cell epitopes for COVID-19 vaccine design and validation.
Not available
S-EPMC8119491 | biostudies-literature
UnknownImmunization with cross-conserved H1N1 influenza CD4+ T-cell epitopes lowers viral burden in HLA DR3 transgenic mice.
Not available
S-EPMC3906390 | biostudies-literature
GenomicsOpen chromatin defined by DNaseI and FAIRE identifies regulatory elements that shape cell-type identity [DNase_seq].
The human body contains thousands of unique cell types, each with specialized functions. Cell identity is governed in large part by gene transcription programs, which are determined by regulatory elements encoded in DNA. To identify regulatory elements active in seven cell lines representative of di...
ORGANISM(S): Homo sapiens 
2011-06-29 | E-GEOD-30224 | biostudies-arrayexpress
GenomicsOpen chromatin defined by DNaseI and FAIRE identifies regulatory elements that shape cell-type identity [FAIRE_seq]
The human body contains thousands of unique cell types, each with specialized functions. Cell identity is governed in large part by gene transcription programs, which are determined by regulatory elements encoded in DNA. To identify regulatory elements active in seven cell lines representative of di...
ORGANISM(S): Homo sapiens 
2011-06-29 | E-GEOD-30225 | biostudies-arrayexpress
GenomicsOpen chromatin defined by DNaseI and FAIRE identifies regulatory elements that shape cell-type identity [ChIP_seq].
The human body contains thousands of unique cell types, each with specialized functions. Cell identity is governed in large part by gene transcription programs, which are determined by regulatory elements encoded in DNA. To identify regulatory elements active in seven cell lines representative of di...
ORGANISM(S): Homo sapiens 
2011-06-29 | E-GEOD-30226 | biostudies-arrayexpress
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