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MetabolomicsFlavonoid Biosynthesis Is Likely More Susceptible to Elevation and Tree Age Than Other Branch Pathways Involved in Phenylpropanoid Biosynthesis in Ginkgo Leaves
Ginkgo leaves are always resources for flavonoids pharmaceutical industry. However, the effect of the elevation and tree age changes on flavonoid biosynthesis have not been detailly explored in Ginkgo leaves. In addition, whether these environmental pressures have similar effects on the biosynthesis...
2020-12-14 | MTBLS962 | MetaboLights
TranscriptomicsIdentification of New Branch Points and Unconventional Introns in Saccharomyces cerevisiae
Spliced messages constitute one-fourth of expressed mRNAs in the yeast Saccharomyces cerevisiae, and most mRNAs in metazoans. Splicing requires 5' splice site (5'SS), branch point (BP), and 3' splice site (3'SS) elements, but the role of the BP in splicing control is poorly understood because BP id...
ORGANISM(S): Saccharomyces cerevisiae S288c 
2016-08-01 | E-GEOD-68022 | biostudies-arrayexpress
MetabolomicsUnexpected similarities between the Schizosaccharomyces and human blood metabolomes, and novel human metabolites (Blood fraction)
Metabolomics, a new branch of chemical biology, provides compositional and quantitative information about the state of organism or cell at the levels of metabolite constituents. We here report non-targeted metabolome of human blood that is made up of plasma and red blood cells (RBCs), using liquid-c...
2014-07-08 | MTBLS87 | MetaboLights
UnknownSMC1 is a downstream effector in the ATM/NBS1 branch of the human S-phase checkpoint.
Not available
S-EPMC155356 | biostudies-literature
ProteomicsCarbohydrates and the oxidative branch of the pentose phosphate pathway modify Bacteroides thetaiotaomicron phage resistance by phase variable S-layers
The human gut microbiota consists of hundreds of bacterial species, some of which persist in the presence of lytic phage that infect them. Bacteroides employ numerous phase-variable strategies to survive in the presence of phage, including capsular polysaccharides (CPS) and S-layer lipoproteins. We ...
ORGANISM(S): Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC 10582 / E50 / VPI-5482) 
2025-08-22 | PXD063111 | Pride
Phage Bacteroides Surface layer 
TranscriptomicsLaSSO, a strategy for genome-wide mapping of intronic lariats and branch-points using RNA-seq
Both canonical and alternative splicing of RNAs is governed by intronic sequence elements and produces transient lariat structures fastened by branch-points within introns. To map precisely the location of branch-points on a genomic scale, we developed LaSSO (Lariat Sequence Site Origin), a data-dri...
ORGANISM(S): Schizosaccharomyces pombe 
2014-03-18 | E-GEOD-50246 | biostudies-arrayexpress
UnknownStructural and functional insights into (S)-ureidoglycolate dehydrogenase, a metabolic branch point enzyme in nitrogen utilization.
Not available
S-EPMC3527362 | biostudies-literature
Transcriptomicshog1, slt2, rlm1, and msn2/4 mutants exposed to zymolyase
This SuperSeries is composed of the following subset Series: GSE9930: Wild type 3 hour exposure to zymolyase GSE9931: hog1 mutant 3 hour exposure to zymolyase GSE9932: slt2 mutant 3 hour exposure to zymolyase GSE9933: rlm1 mutant 3 hour exposure to zymolyase GSE9934: msn2/4 mutant 3 hour exposure to...
ORGANISM(S): Saccharomyces cerevisiae 
2010-06-19 | E-GEOD-12684 | biostudies-arrayexpress
ProteomicsBranch retinal vein occlusion in a porcine model
Branch retinal vein occlusion (BRVO) is a common retinal vascular disease, but global protein changes following the disease remain largely unelucidated. To bring new insights into pathological processes and elucidate potential therapeutic targets, large-scale retinal protein changes following BRVO w...
ORGANISM(S): Sus scrofa domesticus (domestic pig) 
2015-07-30 | PXD001800 | Pride
Retina Brvo Pig 
Methylation profilingFormaldehyde regulates S-adenosylmethionine biosynthesis and one-carbon metabolism
One-carbon metabolism is an essential branch of cellular metabolism that intersects with epigenetic regulation. Here, we show formaldehyde, a one-carbon unit derived from both endogenous sources and environmental exposure, regulates one-carbon metabolism by inhibiting the biosynthesis of S-adenosylm...
ORGANISM(S): Mus musculus 
2023-09-05 | GSE242266 | GEO
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