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ProteomicsSplit-TurboID with Bre5 and Rps2 in Saccharomyces cerevisiae
The in vivo labeling technique Split-Biotin identification (Split-BioID, De Munter et al., 2017, Schopp et al., 2017, Cho et al., 2020) was used to capture the common microenvironment of Bre5 and the ribosomal protein Rps2 (uS5). Biotinylated proteins were enriched from cell lysates using affinity p...
ORGANISM(S): Saccharomyces cerevisiae (Baker's yeast) 
2021-11-10 | PXD028879 | Pride
Split-turboid Rps2 Split-bioid Us5 Silac Saccharomyces cerevisiae Ribosome Bre5 
UnknownThe Ubp3/Bre5 deubiquitylation complex modulates COPII vesicle formation.
Not available
S-EPMC7711842 | biostudies-literature
TranscriptomicsRNA polymerase II stalling at pre-mRNA splice sites is enforced by ubiquitination of the catalytic subunit [RNA-Seq]
Genome wide screens identified negative genetic interactions between several cofactors of the exosome nuclease complex and the Bre5-Ubp3 ubiquitin protease complex. RNA-binding was shown for Bre5 with enrichment for sites over exon 2 of spliced pre-mRNAs and close to poly(A) sites. An inducible spli...
ORGANISM(S): Saccharomyces cerevisiae 
2017-10-22 | GSE94942 | GEO
OtherRNA polymerase II stalling at pre-mRNA splice sites is enforced by ubiquitination of the catalytic subunit [CRAC]
Genome wide screens identified negative genetic interactions between several cofactors of the exosome nuclease complex and the Bre5-Ubp3 ubiquitin protease complex. RNA-binding was shown for Bre5 with enrichment for sites over exon 2 of spliced pre-mRNAs and close to poly(A) sites. An inducible spli...
ORGANISM(S): Saccharomyces cerevisiae 
2017-10-22 | GSE94941 | GEO
UnknownRNA polymerase II stalling at pre-mRNA splice sites is enforced by ubiquitination of the catalytic subunit.
Not available
S-EPMC5673307 | biostudies-literature
UnknownCdc48 and Ufd3, new partners of the ubiquitin protease Ubp3, are required for ribophagy.
Not available
S-EPMC2897114 | biostudies-literature
UnknownyRACK1/Asc1 proxiOMICs-Towards Illuminating Ships Passing in the Night.
Not available
S-EPMC6912217 | biostudies-literature
GenomicsSaccharomyces cerevisiae
RNA polymerase II stalling at pre-mRNA splice sites is enforced by ubiquitination of the catalytic subunit [CRAC]
PRJNA374885 | ENA
UnknownUbiquitylation by the Ltn1 E3 ligase protects 60S ribosomes from starvation-induced selective autophagy.
Not available
S-EPMC3998797 | biostudies-literature
GenomicsSaccharomyces cerevisiae
RNA polymerase II stalling at pre-mRNA splice sites is enforced by ubiquitination of the catalytic subunit [RNA-Seq]
PRJNA374884 | ENA
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