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ProteomicsA proteome-wide map of 20(S)-hydroxycholesterol interactors in cell membranes
Oxysterols (OHCs) are hydroxylated cholesterol metabolites that play ubiquitous roles in health and disease. Due to the non-covalent nature of their interactions and unique partitioning in membranes, the analysis of live-cell, proteome-wide interactions of OHCs remains an unmet challenge. In this Re...
ORGANISM(S): Mus musculus (Mouse) 
2021-11-29 | PXD027787 | Pride
Chemoproteomics probe Cancer Oxysterols Osteogenic molecules Immune response Live-cell analysis 
UnknownDeploying Proteins as Electrolyte Additives in Li-S Batteries: The Multifunctional Role of Fibroin in Improving Cell Performance.
Not available
S-EPMC10266332 | biostudies-literature
MetabolomicsLimitations to Starch Utilization in Barramundi (Lates calcarifer) as Revealed by NMR-Based Metabolomics
Practical diets for commercial barramundi production rarely contain greater than 10% starch, used mainly as a binding agent during extrusion. Alternative ingredients such as digestible starch have shown some capacity to spare dietary protein catabolism to generate glucose. In the present study, a ca...
2020-07-30 | MTBLS1103 | MetaboLights
TranscriptomicsThe transcriptional programme of Salmonella Typhimurium reveals a key role for tryptophan metabolism in biofilms
Background: Biofilm formation by Salmonella species enhances the capacity of these pathogenic bacteria to survive stresses that are commonly encountered within food processing and during host infection. The persistence of Salmonella within the food chain has become a major health concern, as biofilm...
ORGANISM(S): Salmonella enterica 
2010-05-18 | E-GEOD-17246 | biostudies-arrayexpress
GenomicsSolanum tuberosum
Solanum tuberosum Transcriptome or Gene expression
PRJNA80031 | ENA
TranscriptomicsThe Dynamic Transcriptome of Schizosaccharomyces pombe Revealed by RNA/DNA Hybrid Mapping
We determined the strand-specific transcriptome of the fission yeast S. pombe under multiple growth conditions using a novel RNA/DNA hybridization mapping (HybMap) technique. HybMap uses an antibody against an RNA/DNA hybrid to detect RNA molecules hybridized to a high density DNA oligonucleotide ti...
ORGANISM(S): Schizosaccharomyces pombe 
2008-06-29 | E-GEOD-11619 | biostudies-arrayexpress
ProteomicsA sequence-specific RNA acetylation catalyst
N4-acetylcytidine (ac4C) is a ubiquitous RNA modification incorporated by cytidine acetyltransferase enzymes. Here, we report the biochemical characterization of Thermococcus kodakarensis Nat10 (TkNat10), an RNA acetyltransferase involved in archaeal thermotolerance. We demonstrate that TkNat10's ca...
ORGANISM(S): Mus Musculus (ncbitaxon:10090) 
2024-10-14 | MSV000096084 | MassIVE
UnknownNeuropsychiatric safety with liraglutide 3.0 mg for weight management: Results from randomized controlled phase 2 and 3a trials.
Not available
S-EPMC5655710 | biostudies-literature
TranscriptomicsExpression data from Saccharomyces cerevisiae treated with Small Molecule Enhancers of Rapamycin (SMERs)
The target of rapamycin (TOR) plays a central role in eukaryotic cell growth control. With prevalent hyper-activation of the mTOR pathway in human cancers, novel strategies to enhance TOR pathway inhibition are highly desirable. We used a yeast-based high-throughput chemical genetic screen to identi...
ORGANISM(S): Saccharomyces cerevisiae 
2010-07-29 | E-GEOD-22269 | biostudies-arrayexpress
TranscriptomicsThe binding specificity and regulatory effect of WT and redesigned Puf2p [CLIP-Seq]
PUF proteins have become a leading scaffold for designing RNA-binding proteins to contact and control RNAs at will. We analyze the effects of that reengineering across the transcriptome in vivo for the first time. We show, by HITS-CLIP and PAR-CLIP, that S. cerevisiae Puf2p, a non-canonical PUF prot...
ORGANISM(S): Saccharomyces cerevisiae 
2015-12-15 | E-GEOD-73273 | biostudies-arrayexpress
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