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MetabolomicsInsights into Metabolic Changes Caused by the Trichoderma virens-Maize Root Interaction
The interactions of crops with root-colonizing endophytic microorganisms are highly relevant to agriculture, because endophytes can modify plant resistance to pests and increase crop yields. We investigated the interactions between the host plant Zea mays and the endophytic fungus Trichode...
2021-07-08 | MTBLS1964 | MetaboLights
TranscriptomicsM12-8: MRX34 Biomarker study in animals bearing Hep3B orthotopic liver tumors [Illumina]
To identify direct tumor mRNA targets of miR-34a, tumor RNAs isolated from whole tumors from animals treated with negative control and MRX34 Hep3B cells were surgically implanted into the livers of Nod/Scid mice and allow to grow for multiple weeks. Once serum AFP levels reached levels consistent w...
ORGANISM(S): Homo sapiens 
2014-11-05 | E-GEOD-58892 | biostudies-arrayexpress
TranscriptomicsM12-28: MRX34 Biomarker study in animals bearing HuH7 orthotopic liver tumors [Affymetrix]
To identify direct tumor mRNA targets of miR-34a, tumor RNAs isolated from whole tumors from animals treated with negative control and MRX34 HuH7 cells were surgically implanted into the livers of Nod/Scid mice and allow to grow for multiple weeks. Once serum AFP levels reached levels consistent wi...
ORGANISM(S): Homo sapiens 
2014-11-05 | E-GEOD-58800 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of wild type and myo1 knock out yeast to examine differential gene expression patterns in evolved mutants that can successfully perform cytokinesis
In general, yeast strains with myo1 knocked out cannot perform cytokinesis, but some evolve new ways of accomplishing the task. This is an examination of differential gene expression patterns in a selection of evolved mutants that can successfully perform cytokinesis. The purpose is to attempt a m...
ORGANISM(S): Saccharomyces cerevisiae 
2008-11-24 | E-TABM-559 | biostudies-arrayexpress
TranscriptomicsA Comparative Study of Genome Wide Transcriptional Profiles of Primary Hepatocyte in In Vitro Cultures
The liver is one of most important organs in our bodies. It performs many essential functions including metabolism, synthesis, secretion, detoxification, and storage. Hepatocytes are the principal cell type in the liver and are involved in multiple liver-specific functions. There have been several e...
ORGANISM(S): Rattus norvegicus 
2010-06-08 | E-GEOD-20659 | biostudies-arrayexpress
TranscriptomicsDm_y[1]cn[1] bw[1] sp[1]_pupa_WhitePrePupaep2days_TotalRNA_p200_344-346-348_38bp
modENCODE_submission_541 This submission comes from a modENCODE project of Susan Celniker. For full list of modENCODE projects, see http://www.genome.gov/26524648 Project Goal: We will generate over 600 RNA samples in biological triplicate and use them to generate expression profile maps detailing t...
ORGANISM(S): Drosophila melanogaster 
2010-08-04 | E-GEOD-23223 | biostudies-arrayexpress
UnknownWarming of the Indian Ocean threatens eastern and southern African food security but could be mitigated by agricultural development.
Not available
S-EPMC2497460 | biostudies-literature
OtherCarbon source-induced reprogramming of the cell wall proteome and secretome modulates the adherence and drug resistance of the fungal pathogen Candida albicans
PXD ID: PXD000008. Original data file: CW1113_q1 GluLac walls rep 2.mgf. Data published as part of Proteomics 2012 12:3164-79 . From Proteomexchange: {{i}}Cell wall and secretome preparation. C. albicans RM1000 cells grown to mid-exponential phase were harvested by centrifugation. The resulting sup...
ORGANISM(S): Candida_albicans 
GPM11210010990 | GPMDB
Resource Reanalysis 
TranscriptomicsGene expression and genotype in normal heart
Genome-wide association studies have identified a small region at chromosome 9p21.3 strongly associated with coronary heart disease risk. The region contains no protein-coding genes and the mechanism underlying its association with heart disease is unknown. We investigated associations between rs133...
ORGANISM(S): Homo sapiens 
2012-07-03 | E-GEOD-22253 | biostudies-arrayexpress
TranscriptomicsmodENCODE RNA-Seq of Drosophila developmental stage 16-18 hr
Deep Sequencing of mRNA from the Drosophila melanogaster developmental stage 16-18 hr. Keywords: Expression profiling by high throughput sequencing For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODEDataRelease...
ORGANISM(S): Drosophila melanogaster 
2009-08-13 | E-GEOD-17621 | biostudies-arrayexpress
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