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TranscriptomicsPc.2-4 hr OR embryo
modENCODE_submission_5064 This submission comes from a modENCODE project of Gary Karpen. For full list of modENCODE projects, see http://www.genome.gov/26524648 Project Goal: We aim to determine the locations of 125 chromosomal proteins across the Drosophila melanogaster genome. The proteins under s...
ORGANISM(S): Drosophila melanogaster 
2013-03-13 | E-GEOD-45073 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of 4 week old BALB/c_Fech m1Pas mice (Fech) vs with 4 week old control BALB/c mice
Comparison of liver gene expression of 4 week old BALB/c_Fech m1Pas mice(Fech mice for short) with 4 week old control BALB/c mice.
ORGANISM(S): Mus musculus 
2005-10-21 | E-MEXP-194 | biostudies-arrayexpress
TranscriptomicsFrequent switching of Polycomb repressive marks and DNA hypermethylation in the PC3 prostate cancer cell line
Epigenetic reprogramming is commonly observed in cancer, and is hypothesized to involve multiple mechanisms, including DNA methylation and Polycomb repressive complexes (PRCs). Here we devise a new experimental and analytical strategy using customized high density tiling arrays to investigate coordi...
ORGANISM(S): Homo sapiens 
2008-08-07 | E-GEOD-12334 | biostudies-arrayexpress
TranscriptomicsOligonucleotide Array CGH Profiles of Breast Cancer Patients Treated with High Dose or Conventional Chemotherapy
DNA copy number profiles can identify patients with a defect in BRCA1 or BRCA2. We previously showed that patients with a BRCA1 like profile benefit from intensified alkylating chemotherapy (IA, 4 cycles 5-fluorouracyl (5FU), epirubicin, cyclophosphamide (C) + 1 cycle carboplatin, thiotepa and cycl...
ORGANISM(S): Homo sapiens 
2014-12-22 | E-GEOD-50407 | biostudies-arrayexpress
TranscriptomicsPc.Kc
modENCODE_submission_3791 This submission comes from a modENCODE project of Gary Karpen. For full list of modENCODE projects, see http://www.genome.gov/26524648 Project Goal: We aim to determine the locations of 125 chromosomal proteins across the Drosophila melanogaster genome. The proteins under s...
ORGANISM(S): Drosophila melanogaster 
2011-10-12 | E-GEOD-32846 | biostudies-arrayexpress
GenomicsSolexa.Pc.14-16 hr OR embryo
modENCODE_submission_3957 This submission comes from a modENCODE project of Gary Karpen. For full list of modENCODE projects, see http://www.genome.gov/26524648 Project Goal: We aim to determine the locations of 125 chromosomal proteins across the Drosophila melanogaster genome. The proteins under s...
ORGANISM(S): Drosophila melanogaster 
2013-05-28 | E-GEOD-47232 | biostudies-arrayexpress
TranscriptomicsHP1c (MO 462).D.mel 3rd Instar Larvae Nuclei HP1b mutant
modENCODE_submission_5603 This submission comes from a modENCODE project of Gary Karpen. For full list of modENCODE projects, see http://www.genome.gov/26524648 Project Goal: We aim to determine the locations of the major histone modifications across the Drosophila melanogaster genome. The modificat...
ORGANISM(S): Drosophila melanogaster 
2013-03-06 | E-GEOD-44887 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of human THP-1 cells in response to treatment with lipo-polysaccharide for 1 or 4 hours
Effect of LPS in a time dependent manner (1hr or 4hr treatment v untreated) on the THP-1 cell using a focused microarray containing 465 putative or known NF-kappaB regulated genes.
ORGANISM(S): Homo sapiens 
2006-09-29 | E-MEXP-868 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of maize inbred lines and inter-pool hybrids to investigate heterosis for plant height and consistency of gene expression
Loop-design (triangle design with the comparison of each triplet: hybrid + parent 1 and parent 2) and pairwise design (hybrid + parent 1, hybrid + parent 2) were used in the experiment.
Four inbred lines and their four inter-pool hybrids were hybridized respectively in two-colour chips experimen...
ORGANISM(S): Zea mays 
2006-08-17 | E-MEXP-764 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of mouse wild type adult male mouse livers vs transgenic mice expressing human Small Heterodimer Partner in hepatocytes
Comparison of gene expression in adult male mouse livers between wildtype mice and Transgenic mice expressing human Small Heterodimer Partner in hepatocytes.
ORGANISM(S): Mus musculus 
2006-01-01 | E-MEXP-294 | biostudies-arrayexpress
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