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TranscriptomicsTranscriptional profile of Candida albicans DAY286 culture without ketoconazole versus DAY286 culture with 0.04 μg/ml ketoconazole, both at 20% oxygen (normoxia).
Whole genome microarray were used to generate the transcriptional profile of C.albicans in the presence of ketoconazole. RNA was isolated from DAY286 grown with or without ketoconazole in YPD medium in normoxia at 30 degree Celsius for 3.5 h, and labeled with Cy3 or Cy5. Four independent biological ...
ORGANISM(S): Candida albicans 
2010-11-15 | E-GEOD-24074 | biostudies-arrayexpress
TranscriptomicsHypoxia and biofilms in Candida parapsilosis
This SuperSeries is composed of the following subset Series: GSE13717: Transcriptional profile of Candida parapsilosis in SD media GSE13722: Transcriptional response of Candida parapsilosis in low oxygen (hypoxic) conditions in SD media Refer to individual Series
ORGANISM(S): Candida parapsilosis 
2010-05-06 | E-GEOD-13832 | biostudies-arrayexpress
TranscriptomicsTranscriptional profile of Candida albicans DAY286 versus UPC2 delete, both at 1% oxygen (hypoxia).
Whole genome microarray were used to generate the transcriptional profile of C.albicans UPC2 delete in hypoxia. RNA was isolated from DAY286 or UPC2 delete grown in YPD medium in hypoxia at 30 degree Celsius for 3.5 h, and labeled with Cy3 or Cy5. Nine independent biological replicates were compared...
ORGANISM(S): Candida albicans 
2010-11-15 | E-GEOD-24075 | biostudies-arrayexpress
TranscriptomicsTranscriptional profile of Candida albicans during Hypoxic conditions.
Whole genome microarray were used to generate the transcriptional profile of C.albicans in hypoxic condition. RNA was isolated from DAY286 grown in YPD medium in normoxia or hypoxia at 30 degree Celsius for 3.5 h, and labeled with Cy3 or Cy5. Eight independent biological replicates were compared. 2 ...
ORGANISM(S): Candida albicans 
2010-11-15 | E-GEOD-24073 | biostudies-arrayexpress
TranscriptomicsTranscriptional profile of Candida parapsilosis in SD media
Partial genome microarray and plankton cells RNA was isolated from biofilms and from planktonic cells grown in SD media. Samples were labeled with either Cy5 or Cy3. Four independent biological replicates were compared, including dye swaps.
ORGANISM(S): Candida parapsilosis 
2010-05-06 | E-GEOD-13717 | biostudies-arrayexpress
TranscriptomicsTranscriptional response of Candida parapsilosis in low oxygen (hypoxic) conditions in SD media
Whole genome microarray was used to compare the transcriptional profile of C. parapsilosis growing in normoxic (21% oxygen) and hypoxic (1% oxygen) conditions. RNA was isolated from cells grown in SD media at 37°C for 3 h in atmosphere oxygen of 1% oxygen, and labeled with Cy5 or Cy3. Six independe...
ORGANISM(S): Candida parapsilosis 
2010-05-06 | E-GEOD-13722 | biostudies-arrayexpress
TranscriptomicsAnalysis of the transcriptional response of Candida parapsilosis following exposure to farnesol
We used the results of a genome sequence survey to design and manufacture partial genomic microarrays that were applied to determining the transcriptional response of C. parapsilosis to the presence of exogenous farnesol. Keywords: drug response, farnesol, Transcriptional profiling was performed fo...
ORGANISM(S): Candida parapsilosis 
2010-06-11 | E-GEOD-6318 | biostudies-arrayexpress
TranscriptomicsTranscriptional landscape of the pathogenic yeast Candida parapsilosis
This SuperSeries is composed of the following subset Series: GSE32712: Transcriptional profile of Candida parapsilosis CLIB214 21% Oxygen (normoxia) versus at 1% oxygen (hypoxia). GSE32713: Transcriptional profile of Candida parapsilosis CLIB214 versus UPC2 delete, both at 1% oxygen (hypoxia) GSE3...
ORGANISM(S): Candida parapsilosis 
2011-11-30 | E-GEOD-32716 | biostudies-arrayexpress
TranscriptomicsTranscriptional landscape of Candida parapsilosis
We used next generation sequencing (RNA-seq) to determine the transcriptional profile of C. parapsilosis growing in several conditions including different media, temperatures and oxygen concentrations. We have 37 Samples representing BMW and YPD media, 1% and 21% oxygen, 30 and 37 degree celsius tem...
ORGANISM(S): Candida parapsilosis 
2011-11-30 | E-GEOD-32714 | biostudies-arrayexpress
TranscriptomicsTranscriptional response of an azole-resistant Candida parapsilosis isolate [posaconazole].
Azole resistance was induced in vitro by growth of a susceptible C. parapsilosis isolate in the presence of posaconazole. Whole genome microarrays were used to compare the transcriptional response of the posaconazole-resistant and susceptible isolates. Transcriptional profile of an in vitro derived ...
ORGANISM(S): Candida parapsilosis 
2011-04-18 | E-GEOD-27407 | biostudies-arrayexpress
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