Byrne S S - OmicsDI

Show results for

Unknown (1721)
Proteomics (45)
Transcriptomics (25)
Genomics (8)
Models (2)
Metabolomics (2)

Organisms

Schizophyllum commune H4-8 (42)
Mycobacterium tuberculosis SP7 (42)
Oryza sativa Japonica Group (42)
Candidatus Endoriftia persephonae (42)
Mycobacterium tuberculosis SP10 (42)
Mycobacterium tuberculosis SP13 (42)
Mycobacterium tuberculosis SP22 (42)
Chlamydomonas reinhardtii (42)
Pyricularia oryzae P131 (42)
Enterococcus mundtii CRL35 (42)
Oncorhynchus tshawytscha (42)
Pseudomonas canadensis (42)
Strongylocentrotus purpuratus (42)
Influenza A virus (A/California/04/2009(H1N1)) (42)
Homo (42)
Pseudomonas aeruginosa PAO1H2O (42)
Homo sapiens (9)
Mus musculus (4)
Aplysia californica (2)
Macaca mulatta (2)
Lolium perenne (2)
Bos taurus (2)
Ovis aries (2)
Arabidopsis thaliana (2)
Arabidopsis (1)
Drosophila melanogaster (1)
Acanthamoeba polyphaga mimivirus (1)
Porphyromonas gingivalis (1)
mixed sample (1)
Solanum tuberosum (1)

Organisms

Arabidopsis thaliana (2)

Repository

pride (42)
biostudies-arrayexpress (26)
ENA (4)
MassIVE (3)
BioModels (2)
geo (2)
MetaboLights (2)
EGA (1)

Tissue

Cell culture (8)
Embryo (3)
Egg (2)
Heart (2)
Brain (2)
Epithelial cell (2)
Somatic muscle cell (1)
Somatic cell (1)
Conceptus (1)
Seminal fluid (1)
Seminal vesicle (1)
Uterine fluid (1)
Coelomic fluid (1)
Caput epididymis (1)
Cauda epididymis (1)
Seminal vesicle fluid (1)
Myeloblast (1)
Kidney epithelial cell (1)
Osteosarcoma cell line (1)
Embryonic fibroblast (1)
Malignant cell (1)
Early embryonic cell (1)
Cardiac muscle cell (1)
Bone marrow (1)
Permanent cell line cell (1)
Uterine endometrium (1)
Cerebrospinal fluid (1)
Fibroblast (1)
Testis (1)
Blood plasma (1)

Disease

Melanoma (1)
Retinitis (1)
Diffuse midline glioma (1)
Hydrocephalus (1)
Cardiomyopathy (1)
Parasitic infectious disease (1)
Parasitic helminthiasis infectious disease (1)
Endometrial cancer (1)
Lung adenocarcinoma (1)
Acute myeloid leukemia (1)
Alzheimer's disease (1)
Cardiovascular system disease (1)
Acute leukemia (1)
Lung cancer (1)

Technology Type

Mass Spectrometry (42)
Shotgun proteomics (28)
Bottom-up proteomics (10)
Data-dependent acquisition (5)
Gel-based experiment (2)
Affinity purification coupled with mass spectrometry proteomics (2)
Data-independent acquisition (2)
NMR spectroscopy (1)
Mass spectrometry (1)
Top-down proteomics (1)
Chemical cross-linking coupled with mass spectrometry proteomics (1)

Instrument Platform

Illumina HiSeq 2000 (3)
Q Exactive (3)
Illumina Genome Analyzer II (2)
Illumina NovaSeq 6000 (2)
Bruker (1)
Liquid Chromatography MS - positive - reverse phase (1)

Publication Date

2025 (10)
2022 (9)
2024 (8)
2023 (8)
2010 (7)
2014 (6)
2016 (4)
2026 (4)
2018 (3)
2017 (3)
2020 (2)
2019 (2)
2012 (2)
2008 (2)
2021 (2)
2013 (1)
2011 (1)
2009 (1)
2007 (1)
2015 (1)

UNIPROT ID/AC

Q940Y5 (1)
Q9S7Z8 (1)
Q9LTS3 (1)
O04291 (1)
Q9SB04 (1)
P49678 (1)
Q9SSC9 (1)
Q9SL42 (1)
Q96247 (1)
Q9TVS7 (1)
O18660 (1)
O61735 (1)
P07663 (1)

CHEBI ID

CHEBI:16737 (2)
CHEBI:23530 (1)
CHEBI:132318 (1)
CHEBI:132317 (1)
CHEBI:229948 (1)
CHEBI:37054 (1)
CHEBI:15903 (1)
CHEBI:24996 (1)
CHEBI:42191 (1)
CHEBI:15740 (1)
CHEBI:16947 (1)
CHEBI:29987 (1)
CHEBI:30089 (1)
CHEBI:17790 (1)
CHEBI:16810 (1)
CHEBI:18139 (1)
CHEBI:17170 (1)
CHEBI:17925 (1)
CHEBI:71182 (1)
CHEBI:15347 (1)
CHEBI:15724 (1)
CHEBI:16919 (1)
CHEBI:17268 (1)
CHEBI:15428 (1)
CHEBI:17750 (1)
CHEBI:25094 (1)
CHEBI:16449 (1)
CHEBI:27266 (1)
CHEBI:24898 (1)
CHEBI:18186 (1)

Metabolite Name

U5 (1)
U4 (1)
U3 (1)
U2 (1)
U1 (1)
O-acetyl glycoproteins (1)
N-acetyl glycoproteins (1)
Mg-EDTA2- (1)
Ca-EDTA2- (1)
N,N,N-Trimethyl-L-alanyl-L-proline betaine (TMAP) (1)
Phosphatidylcholine (1)
Beta-glucose (1)
Methanol (1)
Dimethylamine (1)
Acetone (1)
Hydroxycotinine (1)
Alpha-glucose (1)
Myo-inositol (1)
Trimethylamine (1)
Formate (1)
Acetate (1)
EDTA (1)
2-oxoglutarate (1)
Creatinine (1)
Creatine (1)
3-hydroxybutyrate (1)
Trimethylamine N-oxide (1)
Betaine (1)
Citrate (1)
Lactate (1)

IsPrivate

False (2)

First Public Date

2016 (2)
2019 (1)
2018 (1)

Modelling Approach

Delayed differential equation model (1)
Ordinary differential equation model (1)

Study type

Transcription profiling by array (16)
RNA-seq of coding RNA (4)
ChIP-seq (2)
RNA-seq of coding RNA from single cells (2)
Plant - High-throughput sequencing (1)
Methylation profiling by array (1)

Release Date

2022 (241)
2021 (233)
2023 (200)
2024 (188)
2020 (173)
2025 (161)
2019 (96)
2018 (87)
2017 (76)
2015 (55)
2014 (48)
2016 (37)
2013 (27)
2012 (25)
2010 (24)
2026 (22)
2011 (12)
2008 (12)
2009 (11)
2007 (5)
2005 (4)
2006 (3)
2001 (2)
2004 (1)
2003 (1)
2002 (1)
1999 (1)
1997 (1)

Lab affiliation

Laboratoire de Spectrométrie de Masse BioOrganique, IPHC, Université de Strasbourg, CNRS, UMR7178, Strasbourg, France (2)
Centre for Proteome Research, Institute of Systems, Molecular & Integrative Biology, University of Liverpool, Crown Street, Liverpool, L69 7ZB, U.K (2)
Centre for Proteome Research Institute of Integrative Biology University of Liverpool Biosciences Building Crown Street Liverpool L69 7ZB UK (1)
Geomicrobiology Center for Applied Geoscience (ZAG) University of Tübingen (1)
University of Newcastle, Callaghan, NSW, Australia (1)
Neuroproteomics, Max Delbrueck Center for Molecular Medicine in the Helmholtz Association, Robert-Roessle-Strasse 10, 13125 Berlin, Germany (1)
Department of Veterinary Biosciences, Melbourne Veterinary School, Faculty of Science, The University of Melbourne, Parkville, Victoria 3010, Australia (1)
1. Cancer Signalling Research Group, School of Biomedical Sciences and Pharmacy, College of Health, Medicine and Wellbeing, University of Newcastle, Callaghan, NSW, AUSTRALIA 2. Precision Medicine Research Program, Hunter Medical Research Institute, New Lambton Heights, NSW, AUSTRALIA 3. Paediatric Program, Mark Hughes Foundation Centre for Brain Cancer Research, College of Health, Medicine, and Wellbeing, Callaghan, NSW, AUSTRALIA (1)
Department of Veterinary Biosciences, The University of Melbourne (1)
Head, Inflammation Division Professor and NHMRC Leadership Fellow Walter and Eliza Hall Institute of Medical Research 1G Royal Parade Parkville, VIC 3052, Australia (lab head) (1)
Dipartimento di Medicina Veterinaria, Università degli Studi di Milano, Milano, Italy (1)
Head, Inflammation Division Professor and NHMRC Leadership Fellow Walter and Eliza Hall Institute of Medical Research 1G Royal Parade Parkville, VIC 3052, Australia (1)
Centre for Proteome Research, Biochemistry and Systems Biology Department, University of Liverpool (1)
Pharmaceutical Sciences - TTB Roche Pharma Research and Early Development Roche Innovation Center Basel F. Hoffmann-La Roche Ltd Building/Room 93/4.44 Grenzacherstrasse 124 CH-4070 Basel, Switzerland (1)
School of Biomedical Sciences and Pharmacy, Priority Research Centre for Reproductive Science, Mothers and Babies Research Centre, Hunter Medical Research Institute, University of Newcastle, Newcastle, New South Wales, Australia (1)
University Hospital Heidelberg, Department of Cardiology, Angiology, and Pneumology, Internal Medicine III, Im Neuenheimer Feld 410, 69120 Heidelberg, Germany (1)
Office for Research, Griffith University, Southport, QLD 4222, Australia (1)
Biomolecular Mass Spectrometry and Proteomics, Bijvoet Centre for Biomolecular Research and Utrecht Institute for Pharmaceutical Sciences, Utrecht University, The Netherlands (1)
1School of Biomedical Sciences and Pharmacy, College of Health, Medicine and Wellbeing, University of Newcastle, NSW, 2308, Australia 2 Precision Medicine Research Program, Hunter Medical Research Institute, New Lambton Heights, NSW, 2305, Australia (1)
Centre for Proteome Research, Institute of Systems, Molecular and Integrative Biology, University of Liverpool; Liverpool, UK (1)
Priority Research Centre for Reproductive Science, School of Environmental and Life Sciences, College of Engineering, Science and Environment, The University of Newcastle, NSW, Australia. Infertility and Reproduction Research Program, Hunter Medical Research Institute, NSW, Australia. (1)
Centre for Proteome Research, Institute of Systems, Molecular and Integrative Biology, University of Liverpool, Liverpool L69 7ZB, UK (1)
Duke University (1)
School of Environmental and Life Sciences, College of Engineering, Science and Environment, The University of Newcastle, University Drive, Callaghan, NSW 2308, Australia. Infertility and Reproduction Research Program, Hunter Medical Research Institute, New Lambton Heights, NSW 2305, Australia. (1)
Cancer Biology and Genetics Program, Memorial Sloan Kettering Cancer Center, New York, NY (1)
CRCM, INSERM, CNRS, Institut Paoli-Calmette, Aix-Marseille University, 27 Boulevard Leï Roure, 13009, Marseille, France (1)
Cardeza Center for Vascular Biology Sidney Kimmel Medical College Thomas Jefferson University (1)
CRCM, INSERM, CNRS, Institut Paoli-Calmettes, Aix-Marseille Univ. , 27 Boulevard Leï Roure, 13009, Marseille, France (1)
Hayley Sharpe, Signalling, Babraham Institute, Cambridge, UK (1)
Priority Research Centre for Reproductive Science, School of Environmental and Life Sciences, Discipline of Biological Sciences, The University of Newcastle, University Drive, Callaghan, NSW 2308, Australia; Hunter Medical Research Institute, Pregnancy and Reproduction Program, New Lambton Heights, NSW 2305, Australia (1)

Previous page
1 / 181
You're on page 1
page 2
page 3
page 4
page 5
page ...
page 181
Next page

Sort by:

Relevance

Page size

Advancing Understanding of the Protein Composition of Human Seminal Extracellular Vesicles

Seminal extracellular vesicles (SEVs) carry a diverse array of bioactive molecules, including proteins, lipids, and nucleic acids, which influence sperm function and have potential to modulate the female reproductive tract immune response after intromission. However, the full spectrum of SEV cargo i...

ORGANISM(S): Mus musculus (Mouse)

2025-12-15 | PXD047212 | Pride

Elucidation of the protein composition of mouse seminal vesicle fluid

The seminal vesicles are male accessory sex glands that contribute the bulk of the seminal plasma in which mammalian spermatozoa are bathed during ejaculation. In addition to helping convey sperm through the ejaculatory duct, seminal vesicle secretions support sperm survival after ejaculation and in...

ORGANISM(S): Mus musculus (Mouse)

2022-01-20 | PXD028564 | Pride

Response of bovine mammary tissue to experimental Staphylococcus aureus infection experiment 3.

Mastitis in dairy cattle can result from infection by a range of microorganisms but is principally caused by coliform bacteria and gram positive bacteria such as Staphylococcus aureus (S. aureus). The former species are often acquired by environmental contamination while S. aureus is particularly pr...

ORGANISM(S): Bos taurus

2010-05-20 | E-GEOD-9681 | biostudies-arrayexpress

Response of bovine mammary tissue to experimental Staphylococcus aureus infection experiment 2.

ORGANISM(S): Bos taurus

2010-05-20 | E-GEOD-9680 | biostudies-arrayexpress

Specific and off-target immune responses following COVID-19 vaccination with ChAdOx1-S and BNT162b2 vaccines-an exploratory sub-study of the BRACE trial.

Not available

S-EPMC11058726 | biostudies-literature

Low heart rate variability from 10-s electrocardiograms is associated with development of non-alcoholic fatty liver disease.

Not available

S-EPMC8776891 | biostudies-literature

The alternative complement pathway appears to be a UVA sensor that leads to systemic immunosuppression

Ultraviolet (UV) wavebands in sunlight are immunomodulatory. About half the amount of UVA within a minimum erythemal dose of sunlight is systemically immunosuppressive, while higher doses protect from UVB immunosuppression in mice. We have previously shown that these responses to UVA are genetically...

ORGANISM(S): Mus musculus

2010-05-16 | E-GEOD-15618 | biostudies-arrayexpress

Rationally Engineered Tandem Facial Amphiphiles for Improved Membrane Protein Stabilization Efficacy.

Not available

S-EPMC7233144 | biostudies-literature

Role of prorenin receptor (P)RR in endometrial cancer cell growth

Endometrial cancer is the most commonly diagnosed gynecologic malignancy in women after breast, lung and colorectal cancer. Despite numerous scientific advances, the incidence and mortality rate of endometrial cancer is on the rise. Considerable research effort has therefore been placed on understan...

ORGANISM(S): Homo sapiens (Human)

2022-04-23 | PXD023042 | Pride

Quantitative proteomics Endometrial epithelial cancer cell Cellular proliferation Tandem mass tags An3ca and hec-1a Atp6ap2 (p)rr Ishikawa Cellular viability

The <i>S</i>. Typhi effector StoD is an E3/E4 ubiquitin ligase which binds K48- and K63-linked diubiquitin.

Not available

S-EPMC6545606 | biostudies-literature

Previous page
1 / 181
You're on page 1
page 2
page 3
page 4
page 5
page ...
page 181
Next page

Sort by:

Relevance

Page size

1803 Results

Show results for

Organisms

Organisms

Repository

Tissue

Disease

Technology Type

Instrument Platform

Publication Date

UNIPROT ID/AC

CHEBI ID

Metabolite Name

IsPrivate

First Public Date

Modelling Approach

Study type

Release Date

Lab affiliation

OmicsDI is part of the ELIXIR infrastructure

Tweets