C3b - OmicsDI

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Unknown (484)
Transcriptomics (320)
Proteomics (35)
Genomics (28)
Metabolomics (8)
Other (1)

Organisms

Homo sapiens (131)
Mus musculus (103)
Arabidopsis thaliana (15)
Vibrio harveyi (9)
Drosophila melanogaster (7)
Saccharomyces cerevisiae (6)
Sus scrofa (6)
Listeria monocytogenes (5)
Caenorhabditis elegans (5)
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Danio rerio (3)
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Schistosoma mansoni (2)
Staphylococcus aureus (2)
Campylobacter jejuni subsp. jejuni 81-176 (1)
Porphyromonas gingivalis W83 (1)
Geobacter sulfurreducens PCA (1)
Escherichia coli str. K-12 substr. W3110 (1)
Coxiella burnetii (1)
Methanosarcina mazei (1)
Haemophilus influenzae (1)
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Lolium perenne (1)
Xenopus laevis (1)
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Organisms

Mus musculus (5)
Homo sapiens (4)
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Canis lupus familiaris (1)
Klebsiella pneumoniae (1)

Repository

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Disease

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Not Available (1)
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Technology Type

Mass Spectrometry (15)
Chemical cross-linking coupled with mass spectrometry proteomics (5)
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Instrument Platform

Illumina NovaSeq 6000 (9)
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NA (1)
Illumina MiniSeq (1)
Illumina HiSeq 2500 (1)
Instrument (1)
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Liquid Chromatography MS - Positive (LC-MS (Positive)) (1)

Publication Date

2010 (60)
2013 (33)
2008 (33)
2011 (29)
2012 (25)
2009 (24)
2014 (23)
2015 (20)
2026 (15)
2016 (15)
2007 (14)
2006 (13)
2005 (12)
2023 (7)
2021 (7)
2017 (6)
2022 (5)
2004 (5)
2024 (5)
2020 (4)
2018 (4)
2019 (3)
2025 (2)
2003 (1)

CHEBI ID

CHEBI:75008 (2)
CHEBI:25801 (2)
CHEBI:17768 (2)
CHEBI:75016 (2)
CHEBI:75010 (2)
CHEBI:16543 (2)
CHEBI:18237 (2)
CHEBI:22660 (2)
CHEBI:28300 (2)
CHEBI:73506 (2)
CHEBI:73527 (2)
CHEBI:73912 (2)
CHEBI:141447 (1)
CHEBI:141426 (1)
CHEBI:32401 (1)
CHEBI:73806 (1)
CHEBI:141391 (1)
CHEBI:15405 (1)
CHEBI:141390 (1)
CHEBI:141442 (1)
CHEBI:141407 (1)
CHEBI:141406 (1)
CHEBI:141403 (1)
CHEBI:141412 (1)
CHEBI:89110 (1)
CHEBI:89348 (1)
CHEBI:178211 (1)
CHEBI:178210 (1)
CHEBI:178209 (1)
CHEBI:21780 (1)

Metabolite Name

N-Acetylputrescine (2)
Glutamine (2)
Aspartic acid (2)
Quercetin 3-O-glucoside 7-O-rhamnoside (1)
Kaempferol 3-O-glucoside 7-O-rhamnoside (1)
S-Adenosyl methionine (1)
4-[(2E)-3,7-dimethyl-5-oxoocta-2,6-dienyl]-3-methylideneoxolan-2-one (1)
Pyridoxamine-5'-phosphate (1)
4-hydroxy-4-[(E)-3-hydroxybut-1-enyl]-3,5,5-trimethylcyclohex-2-en-1-one (1)
(2E)-11-Hydroxy-2-dodecenoic acid (1)
N-epsilon,N-epsilon,N-epsilon-Trimethyllysine (1)
Alpha-aminopimelic acid (1)
N-Acetyl-L-ornithine (1)
Fenchyl alcohol (1)
Pyridoxol (1)
L-Methionine methylsulfonium (1)
N-(2-Hydroxyethyl)-beta-alanine (1)
Beta-Hydroxynorvaline (1)
3,4-Dimethylaniline (1)
Gamma-Amino-beta-hydroxybutyric acid (1)
(R)-2-Aminobutanoic acid (1)
2',3'-Cyclic Adenosine monophosphate (1)
Alpha-D-Talose (1)
Oxo proline (1)
Stearic acid (18:0) (1)
Phenyl sulfoxide (1)
Oxo-octadecadienoic acid (1)
Octadecyl-oxy-octadecanoic acid (SAHSA) (1)
Octadecanoyloxamide (1)
Nonadecanoic acid (C19:0) (1)

First Public Date

2026 (4)
2024 (3)
2023 (3)
2025 (2)
2022 (1)
2021 (1)
2019 (1)
2018 (1)
2013 (1)

Classification

bacteria (2)
fungi (1)

Study type

Transcription profiling by array (247)
RNA-seq of coding RNA (18)
Unknown experiment type (13)
Comparative genomic hybridization by array (5)
MicroRNA profiling by array (5)
ChIP-chip by tiling array (4)
Transcription profiling by tiling array (4)
Other (4)
ChIP-seq (4)
Methylation profiling by array (3)
RNAi profiling by array (2)
RNA-seq of total RNA (2)
Transcription profiling by SAGE (1)
One-color microarray (1)
ChIP-chip by array (1)
Genotyping by array (1)
Genotyping by high throughput sequencing (1)
RNA-seq of coding RNA from single cells (1)
Methylation profiling by high throughput sequencing (1)
RNA-seq of non coding RNA (1)

Release Date

2010 (73)
2022 (53)
2013 (48)
2023 (46)
2011 (46)
2021 (40)
2015 (40)
2012 (40)
2009 (39)
2008 (39)
2020 (38)
2018 (37)
2014 (36)
2017 (35)
2025 (35)
2024 (31)
2016 (28)
2019 (24)
2007 (20)
2006 (17)
2005 (14)
2026 (13)
2004 (6)
2003 (3)
2002 (2)
2001 (1)
2000 (1)

Lab affiliation

1. Wellcome Trust Centre for Cell Biology, Institute of Cell Biology, School of Biological Sciences, University of Edinburgh, UK 2. Department of Bioanalytics, Institute of Biotechnology, Technische Universität Berlin, Germany (2)
Department of Microbiology and Immunology, University of Mississippi Medical Center, Jackson, Mississippi, United States of America (1)
Head of Medical Microbiology and Immunology, Department of Health Science and Technology, Medical Faculty, Aalborg Universtity, Denmark (1)
Department of Infectious Diseases, Immunology and Sexual Health and Department of Medicine, St George Hospital, University of New South Wales, 2 South Street, Kogarah, Sydney, NSW 2217, Australia (1)
Department of Dermatology, University Medical Center Hamburg-Eppendorf, Hamburg, Germany (1)
Yonsei Proteome Research Center, Yonsei University (1)
Institute of Organic Chemistry and Biochemistry, CAS (1)
Institute for Ophthalmic Research, University of Tuebingen (1)
Department of Molecular and Applied Microbiology, Leibniz Institute for Natural Product Research and Infection Biology - Hans Knöll Institute Jena (Leibniz-HKI) (1)
Institute of Biotechnology Technische Universität Berlin Gustav-Meyer-Allee 25 13355 Berlin (1)
Institute of Organic Chemistry and Biochemistry of the CAS (1)
Molecular and Applied Microbiology, Leibniz Institute for Natural Product Research and Infection Biology / Hans Knöll Institute Jena (Leibniz-HKI), Jena, Germany (1)
1. Department of Bioanalytics, Institute of Biotechnology, Technische Universität Berlin, 13355 Berlin, Germany 2. Wellcome Trust Centre for Cell Biology, School of Biological Sciences, University of Edinburgh, Edinburgh EH9 3JR, United Kingdom (1)
1. Biomolecular Interactions, Max Planck Institute for Developmental Biology, Tübingen, Germany; 2. Applied Bioinformatics, Dept. of Computer Science, University of Tübingen, Germany; 3. Quantitative Biology Center (QBiC), University of Tübingen, Germany; 4. Institute for Translational Bioinformatics, University Hospital Tübingen, Germany; 5. Institute for Bioinformatics and Medical Informatics, University of Tübingen, Germany (1)

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Transcriptome analysis of Mucor irregularis C3B

PRJNA540485 | ENA

Quantitative cross-linking/mass spectrometry analysis revealed unknown structure of complement iC3

We applied quantitative cross-linking/mass spectrometry (QCLMS) to interrogate the structure of iC3 (or C3(H2O)), the activated hydrolytic product of the abundant human complement protein C3. The slow but spontaneous and ubiquitous formation of iC3 from C3 initiates antibody-independent activation o...

ORGANISM(S): Homo sapiens (Human)

2016-06-17 | PXD003486 | Pride