Cai Yu Y - OmicsDI

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Unknown (2396)
Proteomics (63)
Metabolomics (16)
Transcriptomics (14)
Genomics (2)

Organisms

Homo sapiens (51)
Mus musculus (12)
Arabidopsis thaliana (3)
Rattus norvegicus (2)
Brassica rapa subsp. chinensis (1)
Bombyx mori (1)
Xenopus laevis (1)
Danio rerio (1)
Klebsiella variicola UCI 18 (1)
Macaca fascicularis fascicularis (1)
Oryctolagus cuniculus (1)
Staphylococcus aureus (1)
Artemisia annua (1)
Lentibacter algarum (1)
Litorivicinus marinus (1)
Polaribacter marinivivus (1)

Repository

iProX (31)
pride (30)
MetaboLights (16)
biostudies-arrayexpress (15)
EGA (1)
MassIVE (1)
PAXDB (1)

Tissue

Cell culture (10)
Epithelial cell (4)
B cell (2)
Kidney (2)
B-cell lymphoma cell (1)
Blood plasma (1)
Blood serum (1)
Cell suspension culture (1)
Flower bud (1)
Heart (1)
Leaf (1)
Lymph node (1)
Permanent cell line cell (1)
Placenta (1)
Plant cell (1)
Prostate adenocarcinoma cell (1)
Stem cell (1)
Uterine cervix (1)

Disease

Breast cancer (5)
Cervix carcinoma (1)
Lymphoma (1)
Malaria (1)
Prostate adenocarcinoma (1)

Technology Type

Mass Spectrometry (30)
Mass spectrometry (12)
Shotgun proteomics (9)
Affinity purification coupled with mass spectrometry proteomics (5)
Data-independent acquisition (4)
SWATH MS (4)
Mass spectrometry assay (3)
Bottom-up proteomics (3)
Data-dependent acquisition (3)
Gel-based experiment (2)
Top-down proteomics (2)
NMR spectroscopy (1)
SRM/MRM (1)

Instrument Platform

Liquid Chromatography MS - positive - reverse phase (7)
Liquid Chromatography MS - negative - reverse phase (6)
Liquid Chromatography MS - negative - hilic (5)
Liquid Chromatography MS - positive - hilic (5)
Liquid Chromatography MS - alternating - reverse phase (2)
Q Exactive mass spectrometer (Thermo Scientific) (1)
Liquid Chromatography MS - Negative (LC-MS (NEG)) (1)
Liquid Chromatography MS - Negative (LC-MS (Negative)) (1)
Liquid Chromatography MS - Positive (LC-MS (POS)) (1)
Liquid Chromatography MS - Positive (LC-MS (Positive)) (1)
Liquid Chromatography MS - negative (1)
Liquid Chromatography MS - positive (1)
Nuclear Magnetic Resonance (NMR) - (1)

Publication Date

2022 (15)
2021 (13)
2025 (11)
2024 (10)
2020 (9)
2023 (8)
2026 (7)
2016 (4)
2019 (4)
2014 (3)
2012 (2)
2018 (2)
2015 (1)
2013 (1)
2011 (1)
2010 (1)
2008 (1)
2006 (1)

UNIPROT ID/AC

1FEH1_WHEAT (1)
4565.EPlTAEP00000010002 (1)
4565.EPlTAEP00000010027 (1)
4565.EPlTAEP00000010105 (1)
4565.EPlTAEP00000010109 (1)
4565.EPlTAEP00000010115 (1)
4565.Traes_1AL_00485097A.2 (1)
4565.Traes_1AL_00744EBC6.2 (1)
4565.Traes_1AL_0121566F8.1 (1)
4565.Traes_1AL_013C8AF6B1.1 (1)
4565.Traes_1AL_014F29DA6.1 (1)
4565.Traes_1AL_015BAE72C.1 (1)
4565.Traes_1AL_01806281A.1 (1)
4565.Traes_1AL_0226AAD07.1 (1)
4565.Traes_1AL_034B63223.1 (1)
4565.Traes_1AL_036E330F0.1 (1)
4565.Traes_1AL_03D275069.1 (1)
4565.Traes_1AL_0458C8353.1 (1)
4565.Traes_1AL_04A4521BB.2 (1)
4565.Traes_1AL_04EA15F57.1 (1)
4565.Traes_1AL_051FE2815.1 (1)
4565.Traes_1AL_087978D78.1 (1)
4565.Traes_1AL_08A2F5FA4.1 (1)
4565.Traes_1AL_08A7811E1.3 (1)
4565.Traes_1AL_0912DED70.1 (1)
4565.Traes_1AL_093513BF1.1 (1)
4565.Traes_1AL_09486AD47.1 (1)
4565.Traes_1AL_0A1043127.1 (1)
4565.Traes_1AL_0A5A0E0D3.1 (1)
4565.Traes_1AL_0A7711D82.1 (1)

CHEBI ID

CHEBI:17895 (8)
CHEBI:16414 (7)
CHEBI:16467 (7)
CHEBI:16828 (7)
CHEBI:16919 (7)
CHEBI:17203 (7)
CHEBI:17351 (7)
CHEBI:18050 (7)
CHEBI:28875 (7)
CHEBI:30769 (7)
CHEBI:15355 (6)
CHEBI:15727 (6)
CHEBI:15756 (6)
CHEBI:16015 (6)
CHEBI:16347 (6)
CHEBI:16643 (6)
CHEBI:16704 (6)
CHEBI:16857 (6)
CHEBI:17154 (6)
CHEBI:17191 (6)
CHEBI:17750 (6)
CHEBI:18019 (6)
CHEBI:18132 (6)
CHEBI:18183 (6)
CHEBI:30860 (6)
CHEBI:15698 (5)
CHEBI:15891 (5)
CHEBI:15940 (5)
CHEBI:15971 (5)
CHEBI:16024 (5)

Metabolite Name

Creatine (6)
L-Tyrosine (6)
Cytosine (5)
L-Carnitine (5)
L-Glutamine (5)
Uracil (5)
Uridine (5)
Adenine (4)
Betaine (4)
Creatinine (4)
Cytidine (4)
Genistein (4)
Glycerophosphocholine (4)
Hypoxanthine (4)
L-Arginine (4)
L-Lysine (4)
L-Methionine (4)
L-Proline (4)
L-Valine (4)
Shikimic acid (4)
Thymidine (4)
Tryptophan (4)
Tyrosine (4)
1-Methylhistidine (3)
3-Hydroxyisovaleric acid (3)
3-Indolepropionic acid (3)
5-Hydroxy-L-tryptophan (3)
5-Hydroxyindoleacetate (3)
5-Hydroxylysine (3)
6-Ketoprostaglandin E1 (3)

Study type

Transcription profiling by array (6)
RNA-seq of coding RNA (4)
Other (2)
RNA-seq of non coding RNA (2)
ChIP-seq (1)

Release Date

2025 (388)
2024 (332)
2022 (320)
2023 (307)
2021 (254)
2020 (209)
2019 (125)
2018 (99)
2016 (82)
2015 (65)
2017 (57)
2026 (56)
2014 (40)
2013 (24)
2012 (19)
2011 (11)
2010 (10)
2006 (4)
2009 (3)
2007 (3)
2008 (1)
2004 (1)
2003 (1)

Lab affiliation

Xiamen University (3)
Department of Biochemistry, University of Texas Southwestern Medical Center, Dallas, 75390, TX, USA (2)
Institute of Immunology and Department of Orthopaedics of the Second Affiliated Hospital, Zhejiang University School of Medicine, Hangzhou, Zhejiang 310058, China (2)
Zhejiang University (2)
1Lineberger Comprehensive Cancer Center, University of North Carolina at Chapel Hill School of Medicine, Chapel Hill, NC 27599, USA 2Department of Biochemistry and Biophysics, University of North Carolina at Chapel Hill School of Medicine, Chapel Hill, NC 27599, USA 3Curriculum in Genetics and Molecular Biology, University of North Carolina at Chapel Hill, Chapel Hill, NC 27599, USA (1)
1Lineberger Comprehensive Cancer Center, University of North Carolina at Chapel Hill, Chapel Hill, NC 27599, USA 2Department of Biochemistry and Biophysics, University of North Carolina at Chapel Hill, Chapel Hill, NC 27599, USA 5Curriculum in Genetics and Molecular Biology, University of North Carolina at Chapel Hill, Chapel Hill, NC 27599, USA 8Department of Pharmacology, University of North Carolina at Chapel Hill, Chapel Hill, NC 27599, USA (1)
CAS Key Laboratory for Biomedical Effects of Nanomaterials and Nanosafety, Institute of High Energy Physics and National Center for Nanoscience and Technology of China, Chinese Academy of Sciences, Beijing 100049, P. R. China (1)
Cancer Biology and Genetics Program, Memorial Sloan Kettering Cancer Center, New York, NY, USA. (1)
Central Laboratory, Wuxi Maternity and Child Health Care Hospital Affiliated to Nanjing Medical University (1)
Children's Hospital of Soochow University, Suzhou (1)
Department of Biology, Institute of Molecular Systems Biology, ETH Zurich, Switzerland Faculty of Science, University of Zurich, Switzerland (1)
Department of Nephrology, Renji Hospital, Shanghai Jiao Tong University School of Medicine, Shanghai, 200127, P.R. China. (1)
Department of Orthopedics, the Eighth Affiliated Hospital of Sun Yat-sen University, Shenzhen 518003, P.R. China (1)
Department of Pharmacy at the Second Affiliated Hospital, Harbin Medical University, Harbin, China. (1)
Department of System Biology, School of Life Sciences, Guangdong Provincial Key Laboratory of Cell Microenvironment and Disease Research, Shenzhen Key Laboratory of Cell Microenvironment, Southern University of Science and Technology, Shenzhen, 518055, China. (1)
ETH Zurich (1)
Insilico Meidicine Shanghai Ltd. (1)
Joint International Research Laboratory of Metabolic & Developmental Sciences, Key Laboratory of Urban Agriculture (South) Ministry of Agriculture, Plant Biotechnology Research Center, Fudan-SJTU-Nottingham Plant Biotechnology R&D Center, School of Agriculture and Biology, Shanghai Jiao Tong University, 800 Dongchuan Road, Shanghai 200240, P. R. China (1)
Proteomics Unit Navarrabiomed-Proteored-ISCIII (Pamplona, Spain) (1)
Rutgers RWJMS (1)
School of Life Sciences, Nanjing University, 163 Xianlin Blvd., Nanjing 210023, China. (1)
The School of Public Health and Medical Technology, Xiamen Medical College (1)
The Second Affiliated Hospital of Zhejiang University, Medicine Cancer Institute (1)
Tianjin Key Laboratory of Cardiovascular Remodeling & Target Organ Injury, PingjinHospital Heart Center (1)
westlake university (1)

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NK Cell-Dependent Growth Inhibition of Lewis Lung Cancer by Yu-Ping-Feng, an Ancient Chinese Herbal Formula.

Not available

S-EPMC4789500 | biostudies-literature

Sperm but not oocyte DNA methylome is inherited by zebrafish early embyros

5-methylcytosine is a major epigenetic modification sometimes called "the fifth nucleotide". However, our knowledge of how offspring inherit the DNA methylome from parents is limited. We generated nine single-base resolution DNA methylomes including zebrafish gametes and early embryos. The...

ORGANISM(S): Danio rerio

2013-05-20 | E-GEOD-44075 | biostudies-arrayexpress

Chloroplast-genome-wide maps of small RNAs in Chinese cabbage (Brassica rapa) and Arabidopsis thaliana (Ler).

Deep sequencing provided evidence that a novel subset of small RNAs were derived from the chloroplast genome of Chinese cabbage (Brassica rapa) and Arabidopsis (Ler). The chloroplast small RNAs (csRNAs) include those derived from mRNA, rRNA, tRNA and intergenic RNA. The rRNA-derived csRNA were prefe...

ORGANISM(S): Brassica rapa subsp. chinensis

2012-03-30 | E-GEOD-28281 | biostudies-arrayexpress

S-phase arrest after vincristine treatment may promote hepatitis B virus replication.

Not available

S-EPMC4316092 | biostudies-literature

MicroRNA expression profiling of the fifth-instar posterior silk gland of Bombyx mori

Background: The growth and development of the posterior silk gland and the biosynthesis of the silk core protein at the fifth larval instar stage of Bombyx mori are of paramount importance for silk production. Results: Here, aided by next-generation sequencing and microarry assay, we profile 1,229 m...

ORGANISM(S): Bombyx mori

2014-07-30 | E-GEOD-56380 | biostudies-arrayexpress

Induction of transcription factor Egr-1 gene expression in astrocytoma cells by Murine coronavirus infection.

Not available

S-EPMC1851928 | biostudies-literature

Effects of dual-task training on chronic ankle instability: a systematic review and meta-analysis.

Not available

S-EPMC10571247 | biostudies-literature

Kinetic characterization of the ATPase and actin-activated ATPase activities of Acanthamoeba castellanii myosin-2.

Not available

S-EPMC3772217 | biostudies-literature

Exploring the long-term sequelae of childhood sexual abuse on risky sexual behavior among Chinese transgender women.