Cao Dong D - OmicsDI

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Unknown (690)
Transcriptomics (25)
Proteomics (25)
Genomics (7)
Metabolomics (6)

Organisms

Homo sapiens (20)
Mus musculus (12)
Oryza sativa (3)
Rattus norvegicus (3)
Drosophila melanogaster (2)
Arabidopsis thaliana (2)
Manihot esculenta (1)
Bombyx mori (1)
Oryza sativa Indica Group (1)
Zea mays (1)
Brachypodium distachyon (1)
Caenorhabditis elegans (1)
Ovis aries (1)
Bos taurus (1)
Escherichia coli (1)
Pyrus x bretschneideri (1)
Shewanella oneidensis MR-1 (1)
Streptococcus pneumoniae D39 (1)
Triticum aestivum (1)

Repository

biostudies-arrayexpress (31)
pride (11)
iProX (10)
MetaboLights (6)
EGA (2)
MassIVE (2)
PeptideAtlas (1)

Tissue

Whole body (3)
Cell culture (2)
Abscission zone (1)
Blood (1)
Blood serum (1)
Cell suspension culture (1)
Intestinal epithelial cell (1)
Peripheral blood mononuclear cell (1)
Plant cell (1)

Disease

Dengue disease (1)
Dengue hemorrhagic fever (1)
Dengue shock syndrome (1)
Susceptibility to dengue virus (1)

Technology Type

Mass Spectrometry (11)
Mass spectrometry (4)
Chemical cross-linking coupled with mass spectrometry proteomics (3)
Shotgun proteomics (3)
Bottom-up proteomics (2)
Gel-based experiment (2)
Mass spectrometry assay (1)
NMR spectroscopy (1)
Data-dependent acquisition (1)
Top-down proteomics (1)

Instrument Platform

Liquid Chromatography MS - negative - reverse phase (2)
Liquid Chromatography MS - positive - reverse phase (2)
10x Chromium with a target of 5,000 cells. Chromium Single Cell 3’ Library & Gel Bead Kit v2 (1)
10X Genomics reagent kit (1)
ScanArray Express HT [PerkinElmer] (1)
NA (1)
Illumina NovaSeq 6000 (1)
Illumina HiSeq 4000 (1)
Q Exactive (1)
Q Exactive Plus (1)
Liquid Chromatography MS - alternating - hilic (1)
Liquid Chromatography MS - negative (1)
Liquid Chromatography MS - negative - reverse-phase (1)
Liquid Chromatography MS - positive - hilic (1)
Liquid Chromatography MS - positive - reverse-phase (1)
Nuclear Magnetic Resonance (NMR) - (1)
LTQ Orbitrap Velos (1)

Publication Date

2023 (9)
2015 (6)
2012 (6)
2013 (5)
2026 (4)
2025 (4)
2010 (4)
2020 (4)
2014 (3)
2022 (3)
2011 (2)
2024 (2)
2021 (2)
2016 (1)
2008 (1)
2007 (1)
2004 (1)
2017 (1)
2019 (1)

UNIPROT ID/AC

A0A5E1 (1)
A0ELI5 (1)
A0EQY3 (1)
A0JLQ7 (1)
A0JNY3 (1)
A0JNY7 (1)
A0MNP4 (1)
A0PJD7 (1)
A0PJL0 (1)
A0PK78 (1)
A0PK81 (1)
A1A553 (1)
A1A557 (1)
A1A558 (1)
A1A596 (1)
A1A5B6 (1)
A1E5T5 (1)
A1ILG8 (1)
A1L013 (1)
A1L0U3 (1)
A1L0U6 (1)
A1L0V6 (1)
A1L317 (1)
A1L329 (1)
A1L341 (1)
A1L347 (1)
A1L353 (1)
A1L361 (1)
A1L366 (1)
A1L3B6 (1)

ENSEMBL ID

ENSMUSG00000021039 (1)
ENSMUSG00000027651 (1)
ENSMUSG00000098557 (1)
ENSMUSP00000069525 (1)
ENSMUSP00000140201 (1)
ENSMUSP00000141097 (1)
ENSMUSP00000141637 (1)

CHEBI ID

CHEBI:16449 (3)
CHEBI:17752 (3)
CHEBI:18012 (3)
CHEBI:25017 (3)
CHEBI:27266 (3)
CHEBI:27897 (3)
CHEBI:28300 (3)
CHEBI:30769 (3)
CHEBI:32816 (3)
CHEBI:116314 (2)
CHEBI:137157 (2)
CHEBI:138426 (2)
CHEBI:142245 (2)
CHEBI:15428 (2)
CHEBI:15727 (2)
CHEBI:15741 (2)
CHEBI:15765 (2)
CHEBI:15891 (2)
CHEBI:15956 (2)
CHEBI:15971 (2)
CHEBI:16027 (2)
CHEBI:16119 (2)
CHEBI:16235 (2)
CHEBI:16335 (2)
CHEBI:16347 (2)
CHEBI:16704 (2)
CHEBI:16708 (2)
CHEBI:16856 (2)
CHEBI:168574 (2)
CHEBI:16865 (2)

Metabolite Name

Alanine (2)
Glucose (2)
Glutamine (2)
Glycine (2)
Histidine (2)
Leucine (2)
Phenylalanine (2)
Shikimic acid (2)
Tyrosine (2)
Valine (2)
(+)-8'-hydroxyabscisic acid (1)
(-)-11-hydroxy-9,10-dihydrojasmonic acid 11-beta-d-glucoside (1)
(-)-lupinine (1)
(11z,14z)-eicosadienoylcarnitine (1)
(1s,2r)-1,2-dihydrodibenzo[b,d]thiophene-1,2-diol (1)
(1s,2r,3s,5s,6s,16e,18e,20r,21s)-11-chloro-21-hydroxy-12,20-dimethoxy-2,5,16-trimethyl-8,23-dioxo-4,24-dioxa-9,22-diazatetracyclo[19.3.1.1~10,14~.0~3,5~]hexacosa-10(26),11,13,16,18-pentaen-6-yl 2-methylpropanoate (1)
(2,7-dimethyloctahydro-1h-cyclopenta[c]pyridin-4-yl)methanol (1)
(2S,2'S)-Pyrosaccharopine (1)
(2e)-2-[(4z)-5-(methylsulfanyl)-4-penten-2-yn-1-ylidene]-1,6-dioxaspiro[4.4]non-3-ene (1)
(2r,3s)-2-methylcitric acid (1)
(2s,3r,4e,8e)-3-hydroxy-2-[methyl(stearoyl)amino]-4,8-octadecadien-1-yl hydrogen sulfate (1)
(2s,3s,4s,5r,6s)-6-(hydroxymethyl)-5-{[(2r,3s,4s,5r,6s)-3,4,5-trihydroxy-6-(hydroxymethyl)-5-{[(2r,3s,4r,5r,6s)-3,4,5-trihydroxy-6-(hydroxymethyl)tetrahydro-2h-pyran-2-yl]oxy}tetrahydro-2h-pyran-2-yl]oxy}tetrahydro-2h-pyran-2,3,4,5-tetrol (1)
(2s,4ar,4br,6as,12bs,12cs,14as)-2-(2-hydroxy-2-propanyl)-12b,12c-dimethyl-3,4,5,6,6a,7,12,12b,12c,13,14,14a-dodecahydro-2h-chromeno[5',6':6,7]indeno[1,2-b]indole-4a(4bh)-carbaldehyde (1)
(2s,4s)-4-amino-2-hydroxy-2-methylpentanedioic acid (1)
(2s,4s)-pinnatanine (1)
(2z)-3-{5-[(4z)-5-(methylsulfanyl)-4-penten-2-yn-1-yl]-2-furyl}acrylaldehyde (1)
(2z,4z)-2-hydroxyhexa-2,4-dienoic acid (1)
(3-methyl-2-butenyl)-benzene (1)
(3S,5S)-3,5-Diaminohexanoate (1)
(3s,5r,6s,7e,9x)-7-megastigmene-3,6,9-triol 9-glucoside (1)

Study type

Transcription profiling by array (12)
RNA-seq of non coding RNA (6)
RNA-seq of coding RNA (4)
ChIP-seq (3)
RNA-seq of coding RNA from single cells (2)
Other (1)
DNA-seq (1)
Proteomic profiling by array (1)
Methylation profiling by high throughput sequencing (1)

Release Date

2025 (127)
2024 (96)
2023 (87)
2022 (75)
2021 (72)
2020 (49)
2018 (34)
2019 (33)
2017 (28)
2026 (27)
2015 (23)
2012 (13)
2016 (12)
2013 (11)
2014 (10)
2011 (8)
2010 (5)
2009 (4)
2007 (3)
2008 (2)
2004 (1)
2005 (1)

Lab affiliation

China. Beijing. Capital Normal University. College of Life Science. Lab of molecular genetics and Proteomics. (1)
College of Horticulture, Nanjing Agricultural University, China (1)
Department of General Surgery, Pancreatic Disease Center, Ruijin Hospital, Shanghai Jiao Tong University School of Medicine, Shanghai, China. (1)
Institute of Computing Technology, CAS (1)
Institute of Molecular Systems Biology, ETH Zürich, Switzerland (1)
Interdisciplinary Research Center on Biology and Chemistry, State Key Laboratory of Chemical Biology, Shanghai Institute of Organic Chemistry, Chinese Academy of Sciences, Shanghai 201210, China (1)
Key Laboratory of Functional Protein Research of Guangdong Higher Education Institutes, Institute of Life and Health Engineering, College of Life Science and Technology, Jinan University, Guangzhou, China (1)
School of Cellular and Molecular Medicine University of Bristol Biomedical Sciences Building University Walk Bristol BS8 1TD, UK (1)
Shenzhen People’s Hospital (1)
The University of Hong Kong (1)
Tianjin First Central Hospital Clinic Institute, Tianjin Medical University, Tianjin, 300070, P.R. China (1)

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Theoretical Study of As₂O₃ Adsorption Mechanisms on CaO surface.

Not available

S-EPMC6416740 | biostudies-literature

Antitumor and Antibacterial Derivatives of Oridonin: A Main Composition of Dong-Ling-Cao.

Not available

S-EPMC6272837 | biostudies-literature

High levels of contamination and antimicrobial-resistant non-typhoidal Salmonella serovars on pig and poultry farms in the Mekong Delta of Vietnam.

Not available

S-EPMC4595858 | biostudies-literature

Lysosomal ATP Transporter SLC17A9 Controls Cell Viability via Regulating Cathepsin D.

Not available

S-EPMC8909234 | biostudies-literature

Oleanolic Acid Exerts Osteoprotective Effects and Modulates Vitamin D Metabolism.

Not available

S-EPMC5852823 | biostudies-literature

Gut microbiota-driven regulation of queen bee ovarian metabolism

With the global prevalence of Varroa mites, more and more beekeepers resort to confining the queen bee in a queen cage to control mite infestation or to breed superior and robust queen bees. However, the impact of such practices on the queen bee remains largely unknown. Therefore, we sub...

2023-09-11 | MTBLS7576 | MetaboLights

mRNA expression profiling in mouse bronchoalveolar stem cells (BASC)

We performed miRNA and mRNA profiling in BASC cells and c-Myc depleted BASC cells. We built potential miRNA-mRNA interaction networks specific to c-Myc regulation in BASCs Replicated profilling for both BASC cells and c-Myc depleted BASC cells.

ORGANISM(S): Mus musculus

2012-01-26 | E-GEOD-30323 | biostudies-arrayexpress

MicroRNA expression profile in mouse bronchoalveolar stem cells (BASC)

ORGANISM(S): Mus musculus

2012-01-26 | E-GEOD-30435 | biostudies-arrayexpress

RNA-seq Analysis of MoRFX1-dependent Genes in Magnaporthe oryzae 70-15

Purpose: The goals of this study are to find out the genes regulated directly or indirectly by the regulatory factor X protein MoRfx1 by RNA-seq in the rice blast fungus Methods: Mycelial mRNAs of the wild type strain 70-15, Î”Morfx1 incubated in H2O at 25ËšC for 4 h, in triplicate independently for...

ORGANISM(S): Magnaporthe oryzae

2016-07-20 | E-GEOD-65296 | biostudies-arrayexpress

Neuropilin-1 Protein May Serve as a Receptor for SARS-CoV-2 Infection: Evidence from Molecular Dynamics Simulations.

Not available

S-EPMC11284781 | biostudies-literature

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753 Results

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