Cao S S - OmicsDI

Show results for

Unknown (17132)
Transcriptomics (3404)
Genomics (555)
Proteomics (527)
Metabolomics (103)
Other (6)

Organisms

Homo sapiens (1344)
Mus musculus (1060)
Saccharomyces cerevisiae (241)
Arabidopsis thaliana (233)
Drosophila melanogaster (202)
Rattus norvegicus (135)
Schizosaccharomyces pombe (57)
Escherichia coli (45)
Oryza sativa (37)
Danio rerio (35)
Caenorhabditis elegans (34)
Escherichia coli str. K-12 substr. MG1655 (33)
Bos taurus (27)
Triticum aestivum (26)
Streptomyces coelicolor (22)
Sus scrofa (17)
Solanum tuberosum (16)
Gallus gallus (16)
Zea mays (16)
Hordeum vulgare (16)
Staphylococcus aureus (16)
Candida albicans (16)
Apis mellifera (14)
Mycobacterium tuberculosis (13)
Vitis vinifera (10)
Canis lupus familiaris (10)
Chlorocebus sabaeus (9)
Streptococcus agalactiae (9)
Salmo salar (9)
Escherichia coli K-12 (9)

Organisms

Mus musculus (4)

Repository

biostudies-arrayexpress (3935)
pride (307)
iProX (121)
MetaboLights (103)
MassIVE (55)
EGA (43)
jPOST (19)
PAXDB (13)
geo (5)
GPMDB (5)
ENA (5)
PanoramaPublic (4)
EVA (1)
PeptideAtlas (1)

Tissue

Cell culture (50)
Epithelial cell (21)
Heart (17)
Plant cell (15)
Blood plasma (13)
Brain (13)
Liver (12)
Lung (10)
Blood (9)
Leaf (9)
Whole body (8)
Blood cell (7)
Blood serum (7)
Spleen (7)
B cell (6)
Hepatocyte (6)
Kidney (6)
Permanent cell line cell (6)
Embryo (4)
Embryonic stem cell (4)
Melanocyte (4)
Oocyte (4)
Placenta (4)
Shoot (4)
T cell (4)
Testis (4)
Bone marrow (3)
HeLa cell (3)
Seed (3)
Skin (3)

Disease

Normal (30)
Lymphoma (9)
Breast cancer (6)
Osteosarcoma (4)
Breast adenocarcinoma (3)
Prostate cancer (3)
Chronic myeloid leukemia (3)
Squamous Cell Carcinoma (2)
Rheumatoid arthritis (2)
Mammary tumor (2)
Adenocarcinoma (2)
Neuroblastoma (2)
"lung disease: control, Diagnosis: non-small cell squamous cell carcinoma" (1)
Toxicity (1)
Moderate (1)
Emphysema (1)
Unspecified peripheral T-cell lymphoma (1)
Perilobar nephrogenic rest (1)
Oropharynx squamous-cell carcinoma in DiseaseLocation oropharynx has DiseaseStaging lymph node negative (N0) (1)
T. circumcincta infection (1)
Uninfected (1)
Uninfected 11dpi (1)
Dengue 2 (JAM1409) infected (1)
Rett syndrome (1)
Colon cancer Dukes C (1)
Post-stasis (1)
B. dendrobatidis infection (1)
Blumeria graminis hordei (powdery mildew) inoculation (1)
Invasive Ductal Carcinoma (1)
Pneumococcal meningitis (1)

Technology Type

Mass Spectrometry (307)
Shotgun proteomics (144)
Mass spectrometry (63)
Bottom-up proteomics (57)
Data-dependent acquisition (38)
Affinity purification coupled with mass spectrometry proteomics (29)
Mass spectrometry assay (28)
Gel-based experiment (17)
Data-independent acquisition (14)
Top-down proteomics (14)
NMR spectroscopy (12)
SWATH MS (8)
Chemical cross-linking coupled with mass spectrometry proteomics (7)
SRM/MRM (5)
Illumina HiSeq 2000 (3)
All-ion fragmentation (3)
Affinity proteomics (2)
Mass spectrometry imaging (2)
CAPILLARY, AB 3730xL Genetic Analyzer (1)
Illumina 2.5M, Illumina HiSeq 2000 (1)
Glycoproteomics (1)
MSE (1)
Metaproteomics (1)
Proteogenomics (1)

Instrument Platform

Illumina NovaSeq 6000 (213)
NextSeq 500 (136)
Illumina HiSeq 2000 (84)
Illumina HiSeq 2500 (78)
Illumina HiSeq 4000 (77)
NextSeq 550 (43)
Illumina MiSeq (40)
Illumina NovaSeq X (24)
NextSeq 2000 (20)
Axon GenePix 4000B scanning hardware (18)
Illumina HiSeq 1500 (14)
Illumina HiSeq 3000 (11)
GenePix 4000A [Axon Instruments] (7)
Illumina Genome Analyzer IIx (7)
Axon- GenePix4000B (6)
GenePix 4000B [Axon Instruments] (6)
DNBSEQ-G400 (6)
ArrayWoRx Biochip Reader [Applied Precision] (5)
G2565BA DNA microarray scanner [Agilent] (5)
Illumina Genome Analyzer II (5)
Vortex (5)
None (5)
BGISEQ-500 (5)
ScanArray 4000 [PerkinElmer] (4)
ScanArray 5000 [PerkinElmer] (4)
GenePix Personal 4100A [Axon Instruments] (4)
G2565AA DNA microarray scanner [Agilent] (4)
NA (4)
10x Genomics Chromium Controller (4)
Ion Torrent Proton (4)

Publication Date

2013 (458)
2010 (424)
2014 (369)
2015 (347)
2012 (325)
2011 (295)
2016 (256)
2008 (210)
2025 (190)
2026 (182)
2009 (177)
2023 (175)
2022 (174)
2021 (162)
2024 (141)
2020 (120)
2007 (119)
2018 (98)
2019 (94)
2005 (81)
2006 (75)
2017 (53)
2004 (32)
2003 (4)

UNIPROT ID/AC

1433B_HUMAN (12)
1433E_HUMAN (12)
1433F_HUMAN (12)
1433G_HUMAN (12)
1433S_HUMAN (12)
1433T_HUMAN (12)
1433Z_HUMAN (12)
2AAA_HUMAN (12)
3HIDH_HUMAN (12)
4F2_HUMAN (12)
5NTD_HUMAN (12)
9606.ENSP00000291295 (12)
9606.ENSP00000330842 (12)
9606.ENSP00000347168 (12)
9606.ENSP00000348924 (12)
9606.ENSP00000349467 (12)
9606.ENSP00000352119 (12)
9606.ENSP00000352627 (12)
9606.ENSP00000355778 (12)
9606.ENSP00000358154 (12)
9606.ENSP00000358160 (12)
9606.ENSP00000364802 (12)
9606.ENSP00000366679 (12)
9606.ENSP00000366956 (12)
9606.ENSP00000366962 (12)
9606.ENSP00000366974 (12)
9606.ENSP00000366999 (12)
9606.ENSP00000367034 (12)
9606.ENSP00000382982 (12)
9606.ENSP00000385479 (12)

ENSEMBL ID

ENSMUSG00000027651 (1)
ENSMUSP00000141097 (1)

CHEBI ID

CHEBI:15891 (23)
CHEBI:17368 (23)
CHEBI:17596 (23)
CHEBI:16704 (22)
CHEBI:16919 (22)
CHEBI:30769 (22)
CHEBI:16737 (21)
CHEBI:32816 (21)
CHEBI:16335 (20)
CHEBI:17568 (20)
CHEBI:15354 (19)
CHEBI:15741 (18)
CHEBI:16359 (18)
CHEBI:17562 (18)
CHEBI:17821 (18)
CHEBI:18237 (18)
CHEBI:27897 (18)
CHEBI:28044 (18)
CHEBI:30915 (18)
CHEBI:15428 (17)
CHEBI:16449 (17)
CHEBI:16708 (17)
CHEBI:17154 (17)
CHEBI:17295 (17)
CHEBI:17895 (17)
CHEBI:18186 (17)
CHEBI:25094 (17)
CHEBI:26271 (17)
CHEBI:28300 (17)
CHEBI:29016 (17)

Metabolite Name

Taurine (25)
Hypoxanthine (24)
Creatine (23)
Uridine (22)
Inosine (20)
Choline (19)
Xanthine (19)
Guanosine (17)
L-Phenylalanine (17)
Thymidine (17)
Creatinine (16)
L-Tyrosine (16)
Thymine (16)
Uracil (16)
Adenosine (15)
Cytidine (14)
Glutamine (14)
L-Histidine (14)
Valine (14)
Xanthosine (14)
Alanine (13)
Arginine (13)
Asparagine (13)
Benzoic acid (13)
Guanine (13)
Histidine (13)
L-Arginine (13)
L-Glutamine (13)
L-Proline (13)
Uric acid (13)

First Public Date

2014 (4)
2013 (1)

Modification

2x(15)N labeled L-lysine (1)
4x(15)N labeled L-arginine (1)
6x(2)H labeled dimethylated L-arginine (1)
N6-dimethyl-L-lysine (1)

Study type

Transcription profiling by array (1797)
RNA-seq of coding RNA (597)
ChIP-seq (445)
ChIP-chip by tiling array (187)
ChIP-chip by array (106)
RNA-seq of coding RNA from single cells (102)
Other (90)
RNA-seq of non coding RNA (72)
Comparative genomic hybridization by array (66)
Methylation profiling by array (48)
Methylation profiling by high throughput sequencing (44)
Unknown experiment type (42)
RNA-seq of total RNA (38)
ATAC-seq (34)
Transcription profiling by tiling array (25)
High-throughput sequencing (18)
DNA-seq (17)
Ribo-seq (16)
Cell line - High-throughput sequencing (14)
Animal - High-throughput sequencing (13)
CUT&RUN (10)
CLIP-seq (8)
Hi-C (8)
RIP-seq (8)
Genotyping by array (7)
Spatial transcriptomics by high-throughput sequencing (7)
MicroRNA profiling by array (7)
Human - High-throughput sequencing (6)
Translation profiling (6)
Transcription profiling by RT-PCR (6)

Release Date

2025 (2793)
2022 (2432)
2024 (2202)
2023 (2111)
2021 (1828)
2020 (1378)
2019 (981)
2018 (891)
2016 (816)
2015 (777)
2017 (707)
2013 (657)
2014 (637)
2026 (529)
2010 (514)
2012 (463)
2011 (426)
2008 (259)
2009 (255)
2007 (151)
2006 (98)
2005 (94)
2004 (45)
2003 (8)
2001 (6)
2002 (2)
2000 (2)
1998 (2)
1999 (1)
1997 (1)

Lab affiliation

Department of Immunology, College of Basic Medical Science, China Medical University, Shenyang, Liaoning 110122, China (5)
Alkali Soil Natural Environmental Science Center, Northeast Forestry University, Key Laboratory of Saline-alkali Vegetation Ecology Restoration in Oil Field, Ministry of Education, Harbin 150040, China (4)
CRUK - Beatson Institute for Cancer Research - Switchback Rd, Bearsden, Glasgow G61 1BD - United Kingdom (4)
DZNE Munich, Neuroproteomics, Feodor-Lynen Str. 17, 81377 Munich, Germany (3)
Fudan University (3)
JiNan (3)
State Key Laboratory of Microbial Metabolism, Joint International Research Laboratory of Metabolic & Developmental Sciences, School of Life Sciences and Biotechnology, Shanghai Jiao Tong University, China. (3)
State Key Laboratory of Natural and Biomimetic Drugs, School of Pharmaceutical Sciences, Peking University, Beijing 100191, China. (3)
The University of Melbourne (3)
Tumor Biology Department Molecular Medicine Program Moffitt Cancer Center Tampa, FL, USA (3)
Beijing Municipal Key Laboratory of Child Development and Nutriomics, Capital Institute of Pediatrics, Beijing, China (2)
China Agricultural University, College of Animal Science and Technolgoy, Animal genetics and breeding (2)
College of Life Sciences (2)
Department of Biochemistry Biophysics and Structural Biology, Department of Biochemistry and Molecular Biophysics, Washington University in St. Louis, St. Louis, Missouri, United States (2)
Department of Experimental Radiation Oncology, The University of Texas MD Anderson Cancer Center, Houston, TX 77030, USA (2)
Department of Physiology & Biophysics, University of California, Irvine, Irvine, California, USA (2)
Division of Nephrology, Tongji Hospital, Tongji Medical College, Huazhong University of Science and Technology (2)
Epigenetics Program, Department of Biochemistry and Biophysics, Perelman School of Medicine, University of Pennsylvania (2)
Fudan university (2)
Huazhong Agricultural University (2)
Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, Beijing 100093, China (2)
Key Laboratory of Zoonosis of Liaoning Province, College of Animal Science & Veterinary Medicine, Shenyang Agricultural University, Shenyang, P.R. China (2)
Raymond H. Wittcoff Distinguished Professor and Head Department of Biochemistry and Molecular Biophysics Washington University School of Medicine St. Louis, MO 63110 (2)
School of Life Science, Fudan University (2)
Shanghai Institute of Materia Medica, Chinese Academy of Sciences (2)
State Key Laboratory of Microbial Metabolism (2)
State Key Laboratory of Reproductive Medicine, Department of Histology and Embryology, Nanjing Medical University, Nanjing 211166, Jiangsu, China (2)
Vanderbilt University (2)
Westlake University, Hangzhou,Zhejiang,CHINA (2)
198 shiqiao road, hangzhou, zhejiang province, P.R.China (1)

Tags

xref:PubMed:15039484 (5)

Previous page
1 / 2175
You're on page 1
page 2
page 3
page 4
page 5
page ...
page 2175
Next page

Sort by:

Relevance

Page size

Transcription profiling of S. pombe reveals Cyclin dependent kinase inhibits re-initiation of a normal S-phase program during G2

To achieve faithful replication of the genome once in each cell cycle, re-initiation of S-phase is prevented in G2 and origins are restricted from re-firing within S-phase. We have investigated the block to re-replication during G2 in fission yeast. The DNA synthesis that occurs when G2/M cyclin d...

ORGANISM(S): Schizosaccharomyces pombe

2009-05-13 | E-MTAB-105 | biostudies-arrayexpress

Transcription profiling by array of a natural hybrid between Saccharomyces cerevisiae and S. kudriavzevii under enological conditions

Genome-wide gene expression of a natural hybrid between Saccharomyces cerevisiae and S. kudriavzevii under enological condition

ORGANISM(S): Saccharomyces kudriavzevii

2011-12-28 | E-TABM-1227 | biostudies-arrayexpress

Transcription profiling of human soluble guanylate cyclase-deficient U937 cells exposed to the nitric oxide (NO) donor S-nitrosoglutathione to provide insight into the cGMP-independent effects of NO

NO effects on gene expression, independent of cGMP, were examined globally. Differentiated human U937 cells that lack soluble guanylate cyclase were exposed to Snitrosoglutathione, a NO donor, or glutathione without or with dibutyryl-cAMP (Bt2cAMP). NO regulated 110 transcripts that annotated dispro...

ORGANISM(S): Homo sapiens

2007-09-11 | E-GEOD-2649 | biostudies-arrayexpress

S. coelicolor M145 Time-course Study in R5- medium (Culture# 3)

Antibiotic biosynthesis in Streptomyces species is controlled by a complex genetic and biochemical network of global and pathway specific regulators. Details of their precise interactions in mediating temporal and spatial expression of secondary metabolite genes remain poorly defined. In this stud...