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TranscriptomicsDose response of carbon monoxide treatment of M. tuberculosis
Transcriptional profiling of M. tuberculosis growing in log phase treated with various concentrations of carbon monoxide versus untreated controls Keywords: Dose response Two condition experiment, CO treated cells at 2000, 200 and 20 ppm versus untreated controls. Biological replicates: 2 replicates...
ORGANISM(S): Mycobacterium tuberculosis 
2008-05-29 | E-GEOD-11095 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of mouse RAW 264.7 macrophages treated with carbon monoxide and lipopolysaccharide
Murine RAW 264.7 peritoneal macrophages were treated with 250 ppm Carbon monoxide (CO) for 3 hours prior to the addition of LPS (10 ng/ml) and then for the subsequent 4 hours of the study. Air-treated cells were maintained for the same time without CO. Total RNA was harvested at 0, 15, 30, 60, 120 a...
ORGANISM(S): Mus musculus 
2007-12-04 | E-GEOD-1906 | biostudies-arrayexpress
TranscriptomicsAssessment of the carbon monoxide metabolism of the hyperthermophilic sulfate-reducing archaeon Archaeoglobus fulgidus VC-16 by comparative transcriptome analyses
The metabolic versatile hyperthermophilic dissimilatory sulfate-reducing archaeon, Archaeoglobus fulgidus VC-16, both utilize carbon monoxide as energy source and is highly resistant to toxic effects of CO. This metabolic capacity was investigated by transcriptional response to growth with CO of cul...
ORGANISM(S): Archaeoglobus fulgidus VC-16 
2015-04-30 | E-MTAB-3035 | biostudies-arrayexpress
TranscriptomicsTranscriptional profiles of yeast on acetate exposed to pure nitrogen or carbon monoxide
Oxygen lack of various severity can force many organisms to enter into recoverable hypometabolic states. To better understand how organisms cope with oxygen deprivation, our lab had previously shown that when challenged with anoxia, both the nematode Caenorhabditis elegans and embryos of the zebrafi...
ORGANISM(S): Saccharomyces cerevisiae 
2008-07-08 | E-GEOD-12004 | biostudies-arrayexpress
TranscriptomicsScreening of a novel strong promoter by RNA sequencing and its application to H2 production in a hyperthermophilic archaeon
A strong promoter increases transcription of the genes of interest and enhances the production of various valuable substances. For a hyperthermophilic archaeon Thermococcus onnurineus NA1, which can produce H2 by carbon monoxide oxidation, we searched for a novel endogenous strong promoter by transc...
ORGANISM(S): Thermococcus onnurineus NA1 
2015-04-28 | E-GEOD-64036 | biostudies-arrayexpress
TranscriptomicsRNA-Seq of Clostridium ljungdahlii with CO as the sources of carbon and energy in exponetial phase against stationary phase
More than 5 g/L ethanol was detected at 84 h in the late-exponential phase with 0.1 MPa at pH 6.0 in the batch fermentation of C. ljungdahlii grown autotrophically. Interestingly, ethanol started to be reassimilated in the stationary phase. In order to understand the metabolic flux of ethanol, compa...
ORGANISM(S): Clostridium ljungdahlii DSM 13528 
2022-07-26 | E-MTAB-7753 | biostudies-arrayexpress
UnknownVisualizing the gas channel of a monofunctional carbon monoxide dehydrogenase.
Not available
S-EPMC9093221 | biostudies-literature
UnknownOrbital contributions to CO oxidation in Mo-Cu carbon monoxide dehydrogenase.
Not available
S-EPMC3959894 | biostudies-literature
UnknownCrystallographic Characterization of the Carbonylated A-Cluster in Carbon Monoxide Dehydrogenase/Acetyl-CoA Synthase.
Not available
S-EPMC7819276 | biostudies-literature
GenomicsGenetic engineering of carbon monoxide dehydrogenases produces distinct autotrophic phenotypes in Clostridium autoethanogenum
Genetic engineering of carbon monoxide dehydrogenases produces distinct autotrophic phenotypes in Clostridium autoethanogenum
PRJNA1430368 | ENA
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