Carpenter R R - OmicsDI

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biostudies-arrayexpress (726)
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2013 (316)
2011 (189)
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2005 (2)
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2018 (1)

CHEBI ID

CHEBI:12962 (1)
CHEBI:133365 (1)
CHEBI:136236 (1)
CHEBI:136239 (1)
CHEBI:136245 (1)
CHEBI:136570 (1)
CHEBI:136664 (1)
CHEBI:136665 (1)
CHEBI:136666 (1)
CHEBI:136667 (1)
CHEBI:136676 (1)
CHEBI:136678 (1)
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CHEBI:15365 (1)
CHEBI:15422 (1)
CHEBI:15428 (1)
CHEBI:15429 (1)
CHEBI:15468 (1)
CHEBI:15531 (1)
CHEBI:15573 (1)
CHEBI:15584 (1)
CHEBI:15611 (1)

Metabolite Name

(6R)-5,6,7,8-Tetrahydrobiopterin (1)
1,3-Diaminopropane.HCl (1)
1,4-Diaminobutane (1)
1-Kestose (1)
1-Methylguanidine (1)
1-Methylhistamine.HCl (1)
1-Methylhistidine (1)
1-Methylnicotinamide.HCl (1)
1-Octacosanol (1)
1-aminocyclopropanecarboxylic acid (1)
2,3-Dihydroxybenzoic Acid (1)
2,3-Pyridinedicarboxylic acid (1)
2,4-dihydroxyacetophenone (1)
2-Deoxyadenosine-5-Monophosphate (1)
2-Deoxyadenosine.H2O (1)
2-Deoxyguanosine (1)
2-Deoxyguanosine-5-Monphosphate (1)
2-Deoxyinosine (1)
2-Deoxyinosine-5-Triphosphate (1)
2-Deoxyribose-5-phosphate Na salt (1)
2-Guanidinopropionic acid (1)
2-Hydroxy-4-methoxyacetophenone (1)
2-Hydroxycinnamic acid (1)
2-Hydroxyisobutyric acid (1)
2-Hydroxyphenylacetic acid (1)
2-Hydroxypyridine (1)
2-Isopropylmalic acid (1)
2-aminoethylphosphonic acid (1)
3,4-Dihydroxyphenyl acetic acid (1)
3,4-Dihydroxyphenyl alanine (1)

First Public Date

2014 (1)

Modification

0.984016 (1)
14.01565 (1)
15.994915 (1)
19.989829 (1)
28.0313 (1)
3.994915 (1)
57.021464 (1)

Study type

ChIP-chip by tiling array (386)
ChIP-seq (145)
Transcription profiling by array (109)
RNA-seq of coding RNA (46)
RNA-seq of non coding RNA (30)
Other (2)
RNA-seq of coding RNA from single cells (2)
Methylation profiling by high throughput sequencing (2)
Unknown experiment type (1)
Spatial transcriptomics by high-throughput sequencing (1)
Comparative genomic hybridization by array (1)
MicroRNA profiling by array (1)

Release Date

2013 (348)
2011 (210)
2021 (112)
2022 (103)
2010 (101)
2020 (86)
2023 (77)
2025 (72)
2015 (72)
2024 (71)
2016 (71)
2018 (64)
2019 (63)
2014 (62)
2017 (49)
2012 (45)
2008 (22)
2009 (17)
2026 (13)
2004 (8)
2007 (7)
2006 (7)
2005 (6)
2003 (2)
2002 (1)
1997 (1)

Lab affiliation

Professor Dept. Cell Biology 615 Michael Street Whitehead 446 Atlanta, GA, 30322 Emory University (4)
Department of Biochemistry (1)
Department of Ecology and Evolution, University of Lausanne, CH-1015 Lausanne, Switzerland (1)
Faculty of Dentistry, Oral & Craniofacial Sciences, King’s College London (London, UK) (1)
GlaxoSmithKline (GSK) (1)
Medical University of Vienna Center for Physiology and Pharmacology Schwarzspanierstr. 17 A-1090 Vienna, Austria Phone: +43-1-40160-31390 Email: christian.w.gruber@meduniwien.ac.at www.meduniwien.ac.at/pharmakologie/ms (1)
Professor of Oral Biology Centre for Host-Microbiome Interactions, Faculty of Dental, Oral & Craniofacial Sciences, King’s College London (1)
Victor Faundez MD, PhD Professor Dept. Cell Biology 615 Michael Street Whitehead 446 Atlanta, GA, 30322 Emory University (1)

Tags

xref:PubMed:25407089 (1)

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ORNL Hr(Rh-R) mouse cutaneous array

These data is from 10 day-old Hr(Rh-R)/Hr(Rh-R) vs Hr(Rh-R)/+ mice. Mouse 15k microarray from the Center for Applied Genomics was used to survey the gene expression. The data was acquired with ImaGene and processed with GeneSight from BioDiscovery. Keywords: Genetic mutants Three pairs of littermate...

ORGANISM(S): Mus musculus

2010-07-01 | E-GEOD-4055 | biostudies-arrayexpress

Near naked hairless, Hr(n), and Hr(Rh-R) mice

This SuperSeries is composed of the following subset Series: GSE4052: Near Naked Hairless mouse skin array GSE4053: ORNL 5wk Hr(n)/+ mice skin array GSE4055: ORNL Hr(Rh-R) mouse cutaneous array Keywords: SuperSeries Refer to individual Series

ORGANISM(S): Mus musculus

2010-07-01 | E-GEOD-4059 | biostudies-arrayexpress

A chromatin link to caste identity in the carpenter ant Camponotus floridanus

The goal of this study was to assay the extent of variation in chromatin organization between 3 ant castes (major and minor female workers and males) in one colony of Camponotus floridanus carpenter ant using ChIPseq. 45 samples total: 30 ChIP samples and 3 inputs for total histone H3, 7 histone H3 ...

ORGANISM(S): Camponotus floridanus

2012-11-26 | E-GEOD-37523 | biostudies-arrayexpress

tidyMicro: a pipeline for microbiome data analysis and visualization using the tidyverse in R.

Not available

S-EPMC7852128 | biostudies-literature

APOBEC3B regulates R-loops and promotes transcription-associated mutagenesis in cancer.

Not available

S-EPMC10562255 | biostudies-literature

Identification of regulators of polyploidization presents therapeutic targetsfor treatment of AMKL

Wen Q, Goldenson B, Silver SJ, Schenone M, Dancik V, Huang Z, Wang LZ, Lewis TA, An WF, Li X, Bray MA, Thiollier C, Diebold L, Gilles L, Vokes MS, Moore CB, Bliss-Moreau M, Verplank L, Tolliday NJ, Mishra R, Vemula S, Shi J, Wei L, Kapur R, Lopez CK, Gerby B, Ballerini P, Pflumio F, Gilliland DG, Go...

ORGANISM(S): Homo Sapiens (ncbitaxon:9606)

2014-01-27 | MSV000078536 | MassIVE

Reference genome of the bicolored carpenter ant, Camponotus vicinus.

Not available

S-EPMC10838126 | biostudies-literature

Applying Faster R-CNN for Object Detection on Malaria Images.

Not available

S-EPMC8691760 | biostudies-literature

Keras R-CNN: library for cell detection in biological images using deep neural networks.

Not available

S-EPMC7353739 | biostudies-literature

Molecular basis for hair loss in mice carrying a novel nonsense mutation (Hrrh-R ) in the hairless gene (Hr).